Evidence map›Paper›PMID 32045395›Full record

ArticleShock (Augusta, Ga.)2020

S1PR1-Associated Molecular Signature Predicts Survival in Patients with Sepsis.

Anlin Feng, Amanda D Rice, Yao Zhang, Gabriel T Kelly, Tong Zhou, Ting Wang

Open access · greenAbstract read
In one paragraph

Article in Shock (Augusta, Ga.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Free Radical-Associated Gene Signature Predicts Survival in Sepsis Patients.International journal of molecular sciences · 2024
    Article
  4. Article
  5. Article
  6. Signal Transduction and Gene Regulation in the Endothelium.Cold Spring Harbor perspectives in medicine · 2023
    Review
  7. Article
  8. Observational
  9. Article
  10. SOX18-associated gene signature predicts sepsis outcome.American journal of translational research · 2022
    Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Anlin FengDepartment of Internal Medicine, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona.
Amanda D RiceDepartment of Internal Medicine, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona.
Yao ZhangDepartment of Internal Medicine, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona.
Gabriel T KellyDepartment of Internal Medicine, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona.
Tong ZhouDepartment of Physiology and Cell Biology, University of Nevada, Reno, Nevada.
Ting WangDepartment of Internal Medicine, College of Medicine-Phoenix, University of Arizona, Phoenix, Arizona.
University of Arizona · USBengbu Medical College · CNUniversity of Nevada, Reno · USUniversity of Phoenix · US

Funding

Protein Chemistry & Biophysics CoreP01HL134610 · NHLBI · UNIVERSITY OF ARIZONA · PI BLACK, STEPHEN M · 2018 to 2022
$11.6M
PKG Signaling and Sepsis Induced ALIR01HL142212 · NHLBI · UNIVERSITY OF ARIZONA · PI BLACK, STEPHEN M, ZEMSKOV, EVGENY A. · 2018 to 2021
$1.8M
NHLBI NIH HHS P01 HL134610NHLBI NIH HHS R01 HL142212
6 · The paper itself

Abstract

backgroundSepsis is a potentially life-threatening complication of an underlying infection that quickly triggers tissue damage in multiple organ systems. To date, there are no established useful prognostic biomarkers for sepsis survival prediction. Sphingosine-1-phosphate (S1P) and its receptor S1P receptor 1 (S1PR1) are potential therapeutic targets and biomarkers for sepsis, as both are active regulators of sepsis-relevant signaling events. However, the identification of an S1PR1-related gene signature for prediction of survival in sepsis patients has yet to be identified. This study aims to find S1PR1-associated biomarkers which could predict the survival of patients with sepsis using gene expression profiles of peripheral blood to be used as potential prognostic and diagnostic tools.

methodsGene expression analysis from sepsis patients enrolled in published datasets from Gene Expression Omnibus was utilized to identify both S1PR1-related genes (co-expression genes or functional-related genes) and sepsis survival-related genes.

resultsWe identified 62-gene and 16-gene S1PR1-related molecular signatures (SMS) associated with survival of patients with sepsis in discovery cohort. Both SMS genes are significantly enriched in multiple key immunity-related pathways that are known to play critical roles in sepsis development. Meanwhile, the SMS performs well in a validation cohort containing sepsis patients. We further confirmed our SMSs, as newly developed gene signatures, perform significantly better than random gene signatures with the same gene size, in sepsis survival prognosis.

conclusionsOur results have confirmed the significant involvement of S1PR1-dependent genes in the development of sepsis and provided new gene signatures for predicting survival of sepsis patients.

Indexed as

AdultAgedAged, 80 and overCohort StudiesFemaleHumansMaleMiddle AgedPredictive Value of TestsROC CurveSepsisSignal TransductionSphingosine-1-Phosphate ReceptorsSurvival RateTranscriptomeS1PR1 protein, humanSphingosine-1-Phosphate Receptors

Identifiers

PMID32045395
PMCPMC7020939
OpenAlexW2946427280

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.