Evidence map›Paper›PMID 32043178›Full record

ArticleJournal of digital imaging2020

A Weak and Semi-supervised Segmentation Method for Prostate Cancer in TRUS Images.

Seokmin Han, Sung Il Hwang, Hak Jong Lee

Abstract read
In one paragraph

Article in Journal of digital imaging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Seokmin HanDepartment of Computer Science and Information Engineering, Korea National University of Transportation, Uiwang-si, Kyunggi-do, South Korea.ORCID http://orcid.org/0000-0001-7243-0657
Sung Il HwangDepartment of Radiology, Seoul National University Bundang Hospital, Seongnam-si, Kyunggi-do, South Korea. hwangsi49@gmail.com.
Hak Jong LeeDepartment of Radiology, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Kyunggi-do, South Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of this research is to exploit a weak and semi-supervised deep learning framework to segment prostate cancer in TRUS images, alleviating the time-consuming work of radiologists to draw the boundary of the lesions and training the neural network on the data that do not have complete annotations. A histologic-proven benchmarking dataset of 102 case images was built and 22 images were randomly selected for evaluation. Some portion of the training images were strong supervised, annotated pixel by pixel. Using the strong supervised images, a deep learning neural network was trained. The rest of the training images with only weak supervision, which is just the location of the lesion, were fed to the trained network to produce the intermediate pixelwise labels for the weak supervised images. Then, we retrained the neural network on the all training images with the original labels and the intermediate labels and fed the training images to the retrained network to produce the refined labels. Comparing the distance of the center of mass of the refined labels and the intermediate labels to the weak supervision location, the closer one replaced the previous label, which could be considered as the label updates. After the label updates, test set images were fed to the retrained network for evaluation. The proposed method shows better result with weak and semi-supervised data than the method using only small portion of strong supervised data, although the improvement may not be as much as when the fully strong supervised dataset is used. In terms of mean intersection over union (mIoU), the proposed method reached about 0.6 when the ratio of the strong supervised data was 40%, about 2% decreased performance compared to that of 100% strong supervised case. The proposed method seems to be able to help to alleviate the time-consuming work of radiologists to draw the boundary of the lesions, and to train the neural network on the data that do not have complete annotations.

Indexed as

Image Processing, Computer-AssistedProstatic NeoplasmsHumansMaleSupervised Machine LearningDeep learningProstate cancerSegmentationTRUSWeak and semi-supervision

Identifiers

PMID32043178
PMCPMC7522148

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.