Evidence map›Paper›PMID 32042062›Full record

ArticleNature communications2020

Molecular basis for N-terminal acetylation by human NatE and its modulation by HYPK.

Sunbin Deng, Nina McTiernan, Xuepeng Wei, Thomas Arnesen, Ronen Marmorstein

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Conformational plasticity links structural instability of NAA10Computational and structural biotechnology journal · 2024
    Article
  8. Article
  9. Article
  10. Acetyltransferase in cardiovascular disease and aging.The journal of cardiovascular aging · 2024
    Article
  11. Impact of Protein NLife (Basel, Switzerland) · 2023
    Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. HYPK promotes the activity of theScience advances · 2022
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Sunbin DengDepartment of Chemistry, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0001-7798-4317
Nina McTiernanDepartment of Biomedicine, University of Bergen, Bergen, Norway.ORCID http://orcid.org/0000-0002-1749-6933
Xuepeng WeiAbramson Family Cancer Research Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-6514-7076
Thomas ArnesenDepartment of Biomedicine, University of Bergen, Bergen, Norway.
Ronen MarmorsteinDepartment of Chemistry, University of Pennsylvania, Philadelphia, PA, 19104, USA. marmor@upenn.edu.ORCID http://orcid.org/0000-0003-4373-4752
Cancer Research Institute · USHaukeland University Hospital · NOUniversity of Bergen · NO

Funding

Molecular Mechanisms, Pathways and Inhibition of Acetyl-Transfer ReactionsR35GM118090 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Ronen Marmorstein · 2016 to 2026
$6.7M
NIGMS NIH HHS R35 GM118090
6 · The paper itself

Abstract

The human N-terminal acetyltransferase E (NatE) contains NAA10 and NAA50 catalytic, and NAA15 auxiliary subunits and associates with HYPK, a protein with intrinsic NAA10 inhibitory activity. NatE co-translationally acetylates the N-terminus of half the proteome to mediate diverse biological processes, including protein half-life, localization, and interaction. The molecular basis for how NatE and HYPK cooperate is unknown. Here, we report the cryo-EM structures of human NatE and NatE/HYPK complexes and associated biochemistry. We reveal that NAA50 and HYPK exhibit negative cooperative binding to NAA15 in vitro and in human cells by inducing NAA15 shifts in opposing directions. NAA50 and HYPK each contribute to NAA10 activity inhibition through structural alteration of the NAA10 substrate-binding site. NAA50 activity is increased through NAA15 tethering, but is inhibited by HYPK through structural alteration of the NatE substrate-binding site. These studies reveal the molecular basis for coordinated N-terminal acetylation by NatE and HYPK.

Indexed as

AcetylationBinding SitesCarrier ProteinsCryoelectron MicroscopyHumansN-Terminal Acetyltransferase AN-Terminal Acetyltransferase EProtein DomainsProtein Processing, Post-TranslationalStructure-Activity RelationshipCarrier ProteinsHYPK protein, humanNAA10 protein, humanNAA15 protein, humanNAA50 protein, humanN-Terminal Acetyltransferase AN-Terminal Acetyltransferase E

Identifiers

PMID32042062
PMCPMC7010799
OpenAlexW3004931376

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.