Evidence map›Paper›PMID 32042036›Full record

ArticleScientific reports2020

Small-worldness favours network inference in synthetic neural networks.

Rodrigo A García, Arturo C Martí, Cecilia Cabeza, Nicolás Rubido

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rodrigo A GarcíaUniversidad de la República, Instituto de Física de Facultad de Ciencias, Montevideo, 11400, Uruguay. rgarcia@fisica.edu.uy.
Arturo C MartíUniversidad de la República, Instituto de Física de Facultad de Ciencias, Montevideo, 11400, Uruguay.
Cecilia CabezaUniversidad de la República, Instituto de Física de Facultad de Ciencias, Montevideo, 11400, Uruguay.
Nicolás RubidoUniversidad de la República, Instituto de Física de Facultad de Ciencias, Montevideo, 11400, Uruguay.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A main goal in the analysis of a complex system is to infer its underlying network structure from time-series observations of its behaviour. The inference process is often done by using bi-variate similarity measures, such as the cross-correlation (CC) or mutual information (MI), however, the main factors favouring or hindering its success are still puzzling. Here, we use synthetic neuron models in order to reveal the main topological properties that frustrate or facilitate inferring the underlying network from CC measurements. Specifically, we use pulse-coupled Izhikevich neurons connected as in the Caenorhabditis elegans neural networks as well as in networks with similar randomness and small-worldness. We analyse the effectiveness and robustness of the inference process under different observations and collective dynamics, contrasting the results obtained from using membrane potentials and inter-spike interval time-series. We find that overall, small-worldness favours network inference and degree heterogeneity hinders it. In particular, success rates in C. elegans networks - that combine small-world properties with degree heterogeneity - are closer to success rates in Erdös-Rényi network models rather than those in Watts-Strogatz network models. These results are relevant to understand better the relationship between topological properties and function in different neural networks.

Indexed as

Models, NeurologicalNeural Networks, ComputerAnimalsCaenorhabditis elegansNerve NetNeuronsSynaptic Potentials

Identifiers

PMID32042036
PMCPMC7010800

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.