Evidence map›Paper›PMID 32042029›Full record

ArticleScientific reports2020

Physicochemical characterization of Pseudomonas stutzeri UFV5 and analysis of its transcriptome under heterotrophic nitrification/aerobic denitrification pathway induction condition.

Lívia Carneiro Fidélis Silva, Helena Santiago Lima, Tiago Antônio de Oliveira Mendes, Adilson Sartoratto, Maira Paula Sousa, Rodrigo Suhett de Souza, Sérgio Oliveira de Paula, Valéria Maia de Oliveira, Cynthia Canedo Silva

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 41 citations in OpenAlex.

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  6. Physiological adaptation and population dynamics of a nitrifying sludge exposed to ampicillin.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Lívia Carneiro Fidélis SilvaDepartment of Microbiology, Federal University of Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
Helena Santiago LimaDepartment of Microbiology, Federal University of Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
Tiago Antônio de Oliveira MendesDepartament of Biochemistry, Federal University of Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
Adilson SartorattoPluridisciplinary Center for Chemical, Biological and Agricultural Research, Campinas State University, Campinas, São Paulo, 13083-970, Brazil.
Maira Paula SousaPetrobras - Research and Development Center (CENPES), Petrobras, Rio de Janeiro, 21941-915, Brazil.
Rodrigo Suhett de SouzaPetrobras - Research and Development Center (CENPES), Petrobras, Rio de Janeiro, 21941-915, Brazil.
Sérgio Oliveira de PaulaDepartment of General Biology, Federal University of Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
Valéria Maia de OliveiraPluridisciplinary Center for Chemical, Biological and Agricultural Research, Campinas State University, Campinas, São Paulo, 13083-970, Brazil.
Cynthia Canedo SilvaDepartment of Microbiology, Federal University of Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil. ccanedo@ufv.br.ORCID http://orcid.org/0000-0002-7102-673X
Universidade Federal de Viçosa · BRPetrobras (Brazil) · BRUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological ammonium removal via heterotrophic nitrification/aerobic denitrification (HN/AD) presents several advantages in relation to conventional removal processes, but little is known about the microorganisms and metabolic pathways involved in this process. In this study, Pseudomonas stutzeri UFV5 was isolated from an activated sludge sample from oil wastewater treatment station and its ammonium removal via HN/AD was investigated by physicochemical and molecular approaches to better understand this process and optimize the biological ammonium removal in wastewater treatment plants. Results showed that P. stutzeri UFV5 removed all the ammonium in 48-72 hours using pyruvate, acetate, citrate or sodium succinate as carbon sources, C/N ratios 6, 8, 10 and 12, 3-6% salinities, pH 7-9 and temperatures of 20-40 °C. Comparative genomics and PCR revealed that genes encoding the enzymes involved in anaerobic denitrification process are present in P. stutzeri genome, but no gene that encodes enzymes involved in autotrophic nitrification was found. Furthermore, transcriptomics showed that none of the known enzymes of autotrophic nitrification and anaerobic denitrification had their expression differentiated and an upregulation of the biosynthesis machinery and protein translation was observed, besides several genes with unknown function, indicating a non-conventional mechanism involved in HN/AD process.

Indexed as

AerobiosisAmmonium CompoundsBacterial ProteinsBiodegradation, EnvironmentalDenitrificationGene Expression Regulation, BacterialHeterotrophic ProcessesNitrificationPseudomonas stutzeriSewageTranscriptomeWastewaterAmmonium CompoundsBacterial ProteinsSewageWastewater

Identifiers

PMID32042029
PMCPMC7010759
OpenAlexW3004956728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.