Evidence map›Paper›PMID 32041529›Full record

ArticleBMC plant biology2020

Identification of two recessive etiolation genes (py1, py2) in pakchoi (Brassica rapa L. ssp. chinensis).

Kun Zhang, Yu Mu, Weijia Li, Xiaofei Shan, Nan Wang, Hui Feng

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  4. QTL mapping and candidate gene analysis reveal two major loci regulating green leaf color in non-heading Chinese cabbage.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kun ZhangCollege of Life Sciences, Shanxi Datong University, Datong, 037009, People's Republic of China.
Yu MuCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Weijia LiInstitute of Carbon Materials Science, Shanxi Datong University, Datong, 037009, People's Republic of China.
Xiaofei ShanCollege of Life Sciences, Shanxi Datong University, Datong, 037009, People's Republic of China.
Nan WangCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Hui FengCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China. fenghuiaaa@syau.edu.cn.
Shanxi Datong University · CNShenyang Agricultural University · CN

Funding

National Natural Science Foundation of China 31672144
6 · The paper itself

Abstract

backgroundLeaf color is a major agronomic trait, which has a strong influence on crop yields. Isolating leaf color mutants can represent valuable materials for research in chlorophyll (Chl) biosynthesis and metabolism regulation.

resultsIn this study, we identified a stably inherited yellow leaf mutant derived from 'Huaguan' pakchoi variety via isolated microspore culture and designated as pylm. This mutant displayed yellow leaves after germination. Its etiolated phenotype was nonlethal and stable during the whole growth period. Its growth was weak and its hypocotyls were markedly elongated. Genetic analysis revealed that two recessive nuclear genes, named py1 and py2, are responsible for the etiolation phenotype. Bulked segregant RNA sequencing (BSR-Seq) showed that py1 and py2 were mapped on chromosomes A09 and A07, respectively. The genes were single Mendelian factors in F

conclusionsOur study identified a Chl deficiency mutant pylm in pakchoi. Two recessive nuclear genes named py1 and py2 had a significant effect on etiolation. Candidate genes regulating etiolation were identified as BraA09004189 and BraA07001774, respectively. These findings will elucidate chlorophyll metabolism and the molecular mechanisms of the gene interactions controlling pakchoi etiolation.

Indexed as

Genes, PlantGenes, RecessiveAmino Acid SequenceBase SequenceBrassica rapaChlorophyllEtiolationPlant LeavesPlant ProteinsSequence AlignmentChlorophyllPlant ProteinsBrassica rapa,BSR-Seq,Etiolation mutant,Genetic mapping

Identifiers

PMID32041529
PMCPMC7011377
OpenAlexW3012719266

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.