Evidence map›Paper›PMID 32040482›Full record

ArticlePloS one2020

Expression of the muscle-associated gene MYF6 in hairy cell leukemia.

Evgeny Arons, Hong Zhou, Mark Sokolsky, Daniel Gorelik, Katherine Potocka, Sarah Davies, Erin Fykes, Katherine Still, Daniel C Edelman, Yonghong Wang and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Evgeny AronsLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.ORCID 0000-0002-0792-7824
Hong ZhouLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Mark SokolskyLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Daniel GorelikLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Katherine PotockaLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Sarah DaviesLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Erin FykesLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Katherine StillLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.
Daniel C EdelmanCancer Genetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Yonghong WangCancer Genetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Paul S MeltzerCancer Genetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Mark RaffeldLaboratory of Pathology, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Adrian WiestnerLaboratory of Lymphoid Malignancies, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, United States of America.
Liqiang XiLaboratory of Pathology, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Hao-Wei WangLaboratory of Pathology, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Maryalice Stetler-StevensonLaboratory of Pathology, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Constance YuanLaboratory of Pathology, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States of America.
Robert J KreitmanLaboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD , United States of America.ORCID 0000-0001-5141-1844
National Institutes of Health · US

Funding

Tumor microenvironment in CLL and MCL: pathogenesis, targets, and therapyZIAHL002346 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI WIESTNER, ADRIAN U · 2009 to 2025
$29.8M
Flow Cytometric Analysis of Benign and Malignant TumorsZICSC009372 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI WANG, HAO-WEI · 2009 to 2025
$29.6M
Molecular Profiling of Clinical SpecimensZICBC011040 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI EDELMAN, DANIEL · 2009 to 2020
$25.5M
Development of Recombinant Toxins to Treat Hematologic MalignanciesZIABC010301 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KREITMAN, ROBERT · 2009 to 2025
$21.7M
Cancer Genomics Technology DevelopmentZIABC011091 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MELTZER, PAUL S. · 2009 to 2025
$16.9M
6 · The paper itself

Abstract

Hairy cell leukemia (HCL) is a purine analog-responsive B-cell malignancy containing the BRAF V600E mutation, expressing CD22, CD11c, CD103, tartrate resistant acid phosphatase (TRAP) CD25, CD123, and annexin 1A. BRAF V600E and the latter 4 markers are usually absent in the more aggressive and chemoresistant variant HCLv. To evaluate differences between HCL and HCLv, expression microarrays comparing HCL with HCLv were performed for 24694 genes using 47323 probes. Microarray data from 35 HCL and 27 HCLv purified samples showed the greatest HCL-HCLv difference in the muscle-associated gene MYF6, expressed by its 2 probes 18.5- and 10.8-fold higher in HCL than HCLv (p<0.0001). By real-time quantitative PCR (RQ-PCR), 100% of 152 classic HCL samples were MYF6-positive, vs 5 (6%) of 90 blood donors. MYF6-expression was also detected in 18 (35%) of 51 with HCLv, 11 (92%) of 12 with HCL expressing unmutated IGHV4-34, 35 (73%) of 48 with chronic lymphocytic leukemia (CLL), and 1 (8%) of 12 with mantle cell lymphoma. Hypomethylation status of MYF6 supported expression in HCL more than HCLv. Posttreatment blood samples becoming negative by flow cytometry remained MYF6+ by RQ-PCR in 42 (48%) of 87 HCL patients, and MYF6 RQ-PCR could detect 1 HCL in 105 normal cells. MYF6, universally expressed in HCL and in most CLL samples, may be a useful biomarker for these leukemias. Further studies are underway to determine the role of MYF6 in HCL.

Indexed as

Gene Expression Regulation, LeukemicAdultAgedDNA MethylationFemaleGene Expression ProfilingHumansLeukemia, Hairy CellLeukemia, Lymphocytic, Chronic, B-CellLimit of DetectionMaleMiddle AgedMusclesMyogenic Regulatory FactorsNeoplasm, Residualmyogenic factor 6Myogenic Regulatory Factors

Identifiers

PMID32040482
PMCPMC7010284
OpenAlexW3005631656

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.