Evidence map›Paper›PMID 32039191›Full record

ArticleFrontiers in bioengineering and biotechnology2020

Combining Machine Learning and Metabolomics to Identify Weight Gain Biomarkers.

Flávia Luísa Dias-Audibert, Luiz Claudio Navarro, Diogo Noin de Oliveira, Jeany Delafiori, Carlos Fernando Odir Rodrigues Melo, Tatiane Melina Guerreiro, Flávia Troncon Rosa, Diego Lima Petenuci, Maria Angelica Ehara Watanabe, Licio Augusto Velloso and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 42 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Identification of novel hypertension biomarkers using explainable AI and metabolomics.Metabolomics : Official journal of the Metabolomic Society · 2024
    Article
  5. Artificial Intelligence in Metabolomics: A Current Review.Trends in analytical chemistry : TRAC · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Precision Medicine Approaches with Metabolomics and Artificial Intelligence.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Combining Machine Learning and Metabolomics to Identify Weight Gain Biomarkers.Frontiers in bioengineering and biotechnology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Flávia Luísa Dias-AudibertInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Luiz Claudio NavarroRECOD Laboratory, Institute of Computing (IC), University of Campinas, Campinas, Brazil.
Diogo Noin de OliveiraInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Jeany DelafioriInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Carlos Fernando Odir Rodrigues MeloInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Tatiane Melina GuerreiroInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Flávia Troncon RosaCentro Universitário Filadélfia, Londrina, Brazil.
Diego Lima PetenuciLaboratory of Studies and Applications of DNA Polymorphisms, Biological Sciences Center, Londrina State University, Londrina, Brazil.
Maria Angelica Ehara WatanabeLaboratory of Studies and Applications of DNA Polymorphisms, Biological Sciences Center, Londrina State University, Londrina, Brazil.
Licio Augusto VellosoDepartment of Internal Medicine, School of Medical Sciences, University of Campinas, Campinas, Brazil.
Anderson Rezende RochaRECOD Laboratory, Institute of Computing (IC), University of Campinas, Campinas, Brazil.
Rodrigo Ramos CatharinoInnovare Biomarkers Laboratory, School of Pharmaceutical Sciences, University of Campinas, Campinas, Brazil.
Universidade Estadual de Campinas (UNICAMP) · BRUniversidade Estadual de Londrina · BRCentro Universitário Filadélfia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Weight gain is a metabolic disorder that often culminates in the development of obesity and other comorbidities such as diabetes. Obesity is characterized by the development of a chronic, subclinical systemic inflammation, and is regarded as a remarkably important factor that contributes to the development of such comorbidities. Therefore, laboratory methods that allow the identification of subjects at higher risk for severe weight-associated morbidity are of utter importance, considering the health, and safety of populations. This contribution analyzed the plasma of 180 Brazilian individuals, equally divided into a eutrophic control group and case group, to assess the presence of biomarkers related to weight gain, aiming at characterizing the phenotype of this population. Samples were analyzed by mass spectrometry and most discriminant features were determined by a machine learning approach using Random Forest algorithm. Five biomarkers related to the pathogenesis and chronicity of inflammation in weight gain were identified. Two metabolites of arachidonic acid were upregulated in the case group, indicating the presence of inflammation, as well as two other molecules related to dysfunctions in the cycle of nitric oxide (NO) and increase in superoxide production. Finally, a fifth case group marker observed in this study may indicate the trigger for diabetes in overweight and obesity individuals. The use of mass spectrometry combined with machine learning analyses to prospect and characterize biomarkers associated with weight gain will pave the way for elucidating potential therapeutic and prognostic targets.

Indexed as

biomarkersmachine learningmetabolomicsobesityrandom forest

Identifiers

PMID32039191
PMCPMC6993102
OpenAlexW3001564603

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.