Evidence map›Paper›PMID 32034162›Full record

ArticleScientific reports2020

Proteomic profiling and identification of significant markers from high-grade osteosarcoma after cryotherapy and irradiation.

Rashmi Madda, Chao-Ming Chen, Jir-You Wang, Cheng-Fong Chen, Kuang-Yu Chao, Yu-Min Yang, Hsin-Yi Wu, Wei-Ming Chen, Po-Kuei Wu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  6. Recent Multiomics Approaches in Endometrial Cancer.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Rashmi MaddaDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Chao-Ming ChenDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Jir-You WangDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Cheng-Fong ChenDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Kuang-Yu ChaoDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Yu-Min YangDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Hsin-Yi WuInstrumentation center, National Taiwan University, Taipei, Taiwan.
Wei-Ming ChenDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan.
Po-Kuei WuDepartment of Orthopedics & Traumatology, Taipei Veterans General Hospital, Taipei, Taiwan. drwuvgh@gmail.com.
Taipei Veterans General Hospital · TWNational Taiwan University · TWNational Yang Ming Chiao Tung University · TWNational Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological reconstruction of allografts and recycled autografts have been widely implemented in high-grade osteogenic sarcoma. For treating tumor-bearing autografts, extracorporeal irradiation (ECIR) and liquid nitrogen (LN) freezing techniques are being used worldwide as a gold standard treatment procedure. Both the methods aim to eradicate the tumor cells from the local recurrence and restore the limb function. Therefore, it is essential and crucial to find, and compare the alterations at molecular and physiological levels of the treated and untreated OGS recycled autografts to obtain valuable clinical information for better clinical practice. Thus, we aimed to investigate the significantly expressed altered proteins from ECIR-and cryotherapy/freezing- treated OGS (n = 12) were compared to untreated OGS (n = 12) samples using LC-ESI-MS/MS analysis, and the selected proteins from this protein panel were verified using immunoblot analysis. From our comparative proteomic analysis identified a total of 131 differentially expressed proteins (DEPs) from OGS. Among these, 91 proteins were up-regulated (2.5 to 3.5-folds), and 40 proteins were down-regulated (0.2 to 0.5 folds) (p < 0.01 and 0.05). The functional enrichment analysis revealed that the identified DEPs have belonged to more than 10 different protein categories include cytoskeletal, extracellular matrix, immune, enzyme modulators, and cell signaling molecules. Among these, we have confirmed two potential candidates' expressions levels such as Fibronectin and Protein S100 A4 using western blot analysis. Our proteomic study revealed that LN-freezing and ECIR treatments are effectively eradicating tumor cells, and reducing the higher expressions of DEPs at molecular levels which may help in restoring the limb functions of OGS autografts effectively. To the best of our knowledge, this is the first proteomic study that compared proteomic profiles among freezing, ECIR treated with untreated OGS in recycled autografts. Moreover, the verified proteins could be used as prognostic or diagnostic markers that reveal valuable scientific information which may open various therapeutic avenues in clinical practice to improve patient outcomes.

Indexed as

CryotherapyAdultAgedBiomarkers, TumorBlotting, WesternBone NeoplasmsCombined Modality TherapyFemaleHumansMaleMiddle AgedNeoplasm ProteinsOsteosarcomaProteomeYoung AdultBiomarkers, TumorNeoplasm ProteinsProteome

Identifiers

PMID32034162
PMCPMC7005698
OpenAlexW3004638459

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.