Evidence map›Paper›PMID 32034147›Full record

ArticleNature communications2020

APOBEC3B-mediated corruption of the tumor cell immunopeptidome induces heteroclitic neoepitopes for cancer immunotherapy.

Christopher B Driscoll, Matthew R Schuelke, Timothy Kottke, Jill M Thompson, Phonphimon Wongthida, Jason M Tonne, Amanda L Huff, Amber Miller, Kevin G Shim, Amy Molan and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
  2. Article
  3. Squamous-state excursions activate APOBEC3A in cancer.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Deaminase Modulation Driving a New Era in Drug Development.International journal of molecular sciences · 2025
    Review
  11. Article
  12. Article
  13. Of Context, Quality, and Complexity: Fine-Combing Tumor Mutational Burden in Immunotherapy-Treated Cancers.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 2 countries.

Christopher B Driscoll *Department of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Matthew R Schuelke *Department of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.ORCID http://orcid.org/0000-0002-8399-1537
Timothy KottkeDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Jill M ThompsonDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Phonphimon WongthidaDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Jason M TonneDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Amanda L HuffDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Amber MillerDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Kevin G ShimDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Amy MolanDepartment of Biochemistry, Molecular Biology & Biophysics, University of Minnesota, Minneapolis, MN, 55455, USA.
Cynthia WetmoreCenter for Cancer and Blood Disorders, Phoenix Children's, Phoenix, AZ, 85016, USA.
Peter SelbyLeeds Institute of Cancer and Pathology (LICAP), Faculty of Medicine and Health, St James' University Hospital, University of Leeds, West Yorkshire, UK.
Adel SamsonLeeds Institute of Cancer and Pathology (LICAP), Faculty of Medicine and Health, St James' University Hospital, University of Leeds, West Yorkshire, UK.
Kevin HarringtonTargeted Therapy Team, Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, SW3 6JB, UK.
Hardev PandhaPostgraduate Medical School, University of Surrey, Guildford, GU2 7XH, UK.
Alan MelcherTranslational Immunotherapy Team, Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, SW3 6JB, UK.
Jose S PulidoDepartment of Ophthalmology, Mayo Clinic, Rochester, MN, 55905, USA.
Reuben HarrisDepartment of Biochemistry, Molecular Biology & Biophysics, University of Minnesota, Minneapolis, MN, 55455, USA.ORCID http://orcid.org/0000-0002-9034-9112
Laura EvginDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Richard G VileDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN, 55905, USA. vile.richard@mayo.edu.
Mayo Clinic · USMayo Clinic in Arizona · USInstitute of Cancer Research · GBUniversity of Leeds · GBUniversity of Minnesota · USCenter for Cancer and Blood Disorders · USUniversity of Surrey · GB

Funding

Targeted MV-CEA as a Potent Antitumor Agent against GBMP50CA108961 · NCI · MAYO CLINIC ROCHESTER · PI ANASTASIADIS, PANAGIOTIS Z. · 2004 to 2015
$22.5M
Medical Scientist Traning Program at Mayo ClinicT32GM065841 · NIGMS · MAYO CLINIC ROCHESTER · PI KAUFMANN, SCOTT H, SCHIMMENTI, LISA A · 2003 to 2022
$5.8M
Enhancing Therapy of Primary and Recurrent Tumors With Systemic Oncolytic VirusR01CA175386 · NCI · MAYO CLINIC ROCHESTER · PI VILE, RICHARD G. · 2014 to 2018
$1.3M
Balancing Efficacy and Toxicity of Intratumoral Reolysin for Diffuse Intrinsic Pontine Glioma (DIPG)F30CA210334 · NCI · MAYO CLINIC ROCHESTER · PI SCHUELKE, MATTHEW · 2016 to 2020
$228k
Cancer Research UK 21855Cancer Research UK 29039NCI NIH HHS F30 CA210334NCI NIH HHS P50 CA108961NCI NIH HHS R01 CA175386NIGMS NIH HHS T32 GM065841
6 · The paper itself

Abstract

APOBEC3B, an anti-viral cytidine deaminase which induces DNA mutations, has been implicated as a mediator of cancer evolution and therapeutic resistance. Mutational plasticity also drives generation of neoepitopes, which prime anti-tumor T cells. Here, we show that overexpression of APOBEC3B in tumors increases resistance to chemotherapy, but simultaneously heightens sensitivity to immune checkpoint blockade in a murine model of melanoma. However, in the vaccine setting, APOBEC3B-mediated mutations reproducibly generate heteroclitic neoepitopes in vaccine cells which activate de novo T cell responses. These cross react against parental, unmodified tumors and lead to a high rate of cures in both subcutaneous and intra-cranial tumor models. Heteroclitic Epitope Activated Therapy (HEAT) dispenses with the need to identify patient specific neoepitopes and tumor reactive T cells ex vivo. Thus, actively driving a high mutational load in tumor cell vaccines increases their immunogenicity to drive anti-tumor therapy in combination with immune checkpoint blockade.

Indexed as

AnimalsCancer VaccinesCell Line, TumorCytidine DeaminaseDrug Resistance, NeoplasmEpitopesFemaleHumansImmunotherapyKiller Cells, NaturalMelanomaMelanoma, ExperimentalMice, Inbred C57BLMinor Histocompatibility AntigensMutationT-LymphocytesAPOBEC3B protein, humanCancer VaccinesCytidine DeaminaseEpitopesMinor Histocompatibility Antigens

Identifiers

PMID32034147
PMCPMC7005822
OpenAlexW3004452260

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.