Evidence map›Paper›PMID 32032716›Full record

ArticleJournal of neuroscience methods2020

Functional clustering of whole brain white matter fibers.

Zhipeng Yang, Xiaojie Li, Jiliu Zhou, Xi Wu, Zhaohua Ding

Open access · greenAbstract read
In one paragraph

Article in Journal of neuroscience methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Zhipeng YangDepartment of Computer Science, Chengdu University of Information Technology, Chengdu, 610225, PR China; College of Electronic Engineering, Chengdu University of Information Technology, Chengdu, 610225, PR China.
Xiaojie LiDepartment of Computer Science, Chengdu University of Information Technology, Chengdu, 610225, PR China.
Jiliu ZhouDepartment of Computer Science, Chengdu University of Information Technology, Chengdu, 610225, PR China.
Xi WuDepartment of Computer Science, Chengdu University of Information Technology, Chengdu, 610225, PR China.
Zhaohua DingVanderbilt University Institute of Imaging Science, Nashville, TN, 37232, United States; Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, 37232, United States; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, 37232, United States. Electronic address: zhaohua.ding@vanderbilt.edu.
Chengdu University of Information Technology · CNVanderbilt University · US

Funding

Resting State Connectivity in White MatterR01NS093669 · NINDS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GORE, JOHN C · 2016 to 2020
$2.7M
NINDS NIH HHS R01 NS093669
6 · The paper itself

Abstract

backgroundLarge numbers of fibers produced by fiber tractography are often grouped into bundles with anatomical interpretations. Traditional clustering methods usually generate bundles with spatial anatomic coherences only. To associate bundles with function, some studies incorporate functional connectivity of grey matter to guide clustering on the premise that fibers provide the basis of information transmission for cortex. However, functional properties along fiber tracts were ignored by these methods. Considering several recent studies showing that BOLD (Blood-Oxygen-Level Dependent) signals of white matter contain functional information of axonal fibers, this work is motivated to demonstrate that whole brain white matter fibers can be clustered with integration of functional and structural information they contain. NEW

methodsWe proposed a novel algorithm based on Gaussian mixture model and expectation maximization to achieve optimal bundling with both structural and functional coherences. The functional coherence between two fibers is defined as the average correlation in BOLD signal between corresponding points. Whole brain fibers under resting state and sensory stimulation conditions were used to demonstrate the effectiveness of the proposed technique.

resultsOur in vivo experiments show the robustness of proposed algorithm and influences of weights between structure and function, and repeatability of reconstructed major bundles across individuals. COMPARISON WITH EXISTING

methodsIn contrast to traditional methods, the proposed clustering method can achieve structurally more compact bundles, which are specifically related to evoking function.

conclusionThe proposed concept and framework can be used to identify functional pathways and their structural features under specific function loading.

Indexed as

White MatterAlgorithmsBrainCluster AnalysisDiffusion Tensor ImagingHumansImage Processing, Computer-AssistedFiber clusteringFunctional MRIMulti-modalityWhite matter fibers

Identifiers

PMID32032716
PMCPMC7093303
OpenAlexW3005954710

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.