Evidence map›Paper›PMID 32030575›Full record

ArticleVirus genes2020

Genetic characterization of bovine ephemeral fever virus in southern China, 2013-2017.

Jia Kun, Jia Rongrong, Wang Xiangbin, Zhao Yan, Dou Yiping, Lu Gang, Zhou Pei, Li Shoujun

Abstract readHistorical Article
PubMed Publisher
In one paragraph

Article in Virus genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jia KunCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Jia RongrongCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Wang XiangbinCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.ORCID http://orcid.org/0000-0002-4306-4827
Zhao YanCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Dou YipingCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Lu GangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Zhou PeiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China.
Li ShoujunCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, People's Republic of China. shoujunli@scau.edu.cn.
South China Agricultural University · CN

Funding

Guangdong Natural Science Foundation 2017A030310032Guangdong Provincial Key Laboratory of Prevention and Control for Severe Clinical Animal Diseases 2017B030314142Modern Agricultural Science and Technology Innovation Alliance of Guangdong Province 2017LM2150Pearl River Nova Program of Guangzhou 201610010073Science and Technology Planning Project of Guangdong Province (CN) 2015B020203005The China Scholar council 201807630008
6 · The paper itself

Abstract

Bovine ephemeral fever virus (BEFV) can cause bovine ephemeral fever and is an economically important arbovirus of cattle. To expand the knowledge of the molecular epidemiology of BEFV in southern China, the complete surface glycoprotein G gene of BEFV was sequenced from samples collected in five restricted outbreaks from 2013 to 2017, namely 2013ZH, 2014HM, 2015GX, 11082-2016, and qy2017. It was noted that both 2014HM and 11082-2016 were detected in cattle regularly vaccinated with inactivated vaccine. Phylogenetic analysis demonstrated that all five strains grouped into cluster I. However, qy2017 was closer to the BEFV strains identified in Thailand, Japan, and Taiwan after 2000, while 2013ZH, 2014HM, 2015GX, and 11082-2016 were closer to the Chinese strains in 2011 and the Turkey strains in 2012. The analysis of antigenic sites indicated that several amino acid changes occurred between the five strains and the vaccine strain. Importantly, one novel amino acid mutation site was observed in the putative N-linked glycosylation sites of 2013ZH, 2014HM, 2015GX, and 11082-2016. Our study indicated novel genetic characteristics of the newly emerging BEFV strains in southern China and the necessity of updating the component of commercially available inactivated BEFV vaccines in China.

Indexed as

Genome, ViralGenomicsAnimalsAntigens, ViralCattleChinaEphemeral FeverEphemeral Fever Virus, BovineHistory, 21st CenturyMolecular EpidemiologyPhylogenyViral ProteinsAntigens, ViralViral ProteinsBovine ephemeral feverGenetic characterizationGlycoprotein

Identifiers

PMID32030575
OpenAlexW3004669398

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.