Evidence map›Paper›PMID 32029845›Full record

ArticleScientific reports2020

A 124-plex Microhaplotype Panel Based on Next-generation Sequencing Developed for Forensic Applications.

Jing-Bo Pang, Min Rao, Qing-Feng Chen, An-Quan Ji, Chi Zhang, Ke-Lai Kang, Hao Wu, Jian Ye, Sheng-Jie Nie, Le Wang

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  17. Research progress on application of microhaplotype in forensic genetics.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jing-Bo Pang *National Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Min Rao *National Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Qing-Feng Chen *National Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
An-Quan JiNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Chi ZhangNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Ke-Lai KangNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Hao WuNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China.
Jian YeNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China. wangle_02@163.com.
Sheng-Jie NieSchool of Forensic Medicine, Kunming Medical University, Kunming, 650500, PR China. 879456764@qq.com.
Le WangNational Engineering Laboratory for Forensic Science, Institute of Forensic Science, Ministry of Public Security, Beijing, 100038, PR China. yejian77@126.com.ORCID http://orcid.org/0000-0002-8687-239X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microhaplotypes are an emerging type of forensic genetic marker that are expected to support multiple forensic applications. Here, we developed a 124-plex panel for microhaplotype genotyping based on next-generation sequencing (NGS). The panel yielded intralocus and interlocus balanced sequencing data with a high percentage of effective reads. A full genotype was determined with as little as 0.1 ng of input DNA. Parallel mixture experiments and in-depth comparative analyses were performed with capillary-electrophoresis-based short tandem repeat (STR) and NGS-based microhaplotype genotyping, and demonstrated that microhaplotypes are far superior to STRs for mixture deconvolution. DNA from Han Chinese individuals (n = 256) was sequenced with the 124-plex panel. In total, 514 alleles were observed, and the forensic genetic parameters were calculated. A comparison of the forensic parameters for the 20 microhaplotypes with the top A

Indexed as

Forensic GeneticsAllelesAsian PeopleDNADNA FingerprintingGenotypeHaplotypesHigh-Throughput Nucleotide SequencingHumansLinkage DisequilibriumMicrosatellite RepeatsPolymorphism, Single NucleotideProbabilitySequence Analysis, DNADNA

Identifiers

PMID32029845
PMCPMC7004988

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.