Evidence map›Paper›PMID 32029818›Full record

ArticleScientific reports2020

On-site single pollen metabolomics reveals varietal differences in phosphatidylinositol synthesis under heat stress conditions in rice.

Hiroshi Wada, Yuto Hatakeyama, Taiken Nakashima, Hiroshi Nonami, Rosa Erra-Balsells, Makoto Hakata, Keisuke Nakata, Kenzo Hiraoka, Yayoi Onda, Hiroshi Nakano

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Hiroshi Wada *Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, 496 Izumi, Chikugo, Fukuoka, 833-0041, Japan. hwada@affrc.go.jp.ORCID http://orcid.org/0000-0003-0510-5744
Yuto Hatakeyama *Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, 496 Izumi, Chikugo, Fukuoka, 833-0041, Japan.ORCID http://orcid.org/0000-0003-0526-4091
Taiken NakashimaFaculty of Agriculture, Hokkaido University, Kita-9 Nishi-9, Kita-Ku, Sapporo, 060-8589, Japan.ORCID http://orcid.org/0000-0002-9384-7993
Hiroshi NonamiGraduate School of Agriculture, Ehime University, 3-5-7 Tarumi, Matsuyama, 790-8566, Japan.ORCID http://orcid.org/0000-0002-4336-9049
Rosa Erra-BalsellsDepartment of Organic Chemistry, University of Buenos Aires, Buenos Aires, 1428, Argentina.ORCID http://orcid.org/0000-0003-0169-0173
Makoto HakataKyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, 496 Izumi, Chikugo, Fukuoka, 833-0041, Japan.ORCID http://orcid.org/0000-0001-9771-4103
Keisuke NakataGraduate School of Agriculture, Ehime University, 3-5-7 Tarumi, Matsuyama, 790-8566, Japan.ORCID http://orcid.org/0000-0003-3767-1089
Kenzo HiraokaClean Energy Research Center, The University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi, 400-8511, Japan.ORCID http://orcid.org/0000-0002-5352-5914
Yayoi OndaGraduate School of Agriculture, Ehime University, 3-5-7 Tarumi, Matsuyama, 790-8566, Japan.ORCID http://orcid.org/0000-0003-1398-3635
Hiroshi NakanoKyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, 496 Izumi, Chikugo, Fukuoka, 833-0041, Japan.ORCID http://orcid.org/0000-0002-0564-2550
National Agriculture and Food Research Organization · JPEhime University · JPHokkaido University · JPTakeda (Japan) · JPUniversidad de Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although a loss of healthy pollen grains induced by metabolic heat responses has been indicated to be a major cause of heat-induced spikelet sterility under global climate change, to date detailed information at pollen level has been lacking due to the technical limitations. In this study, we used picolitre pressure-probe-electrospray-ionization mass spectrometry (picoPPESI-MS) to directly determine the metabolites in heat-treated single mature pollen grains in two cultivars, heat-tolerant cultivar, N22 and heat-sensitive cultivar, Koshihikari. Heat-induced spikelet fertility in N22 and Koshihikari was 90.0% and 46.8%, respectively. While no treatment difference in in vitro pollen viability was observed in each cultivar, contrasting varietal differences in phosphatidylinositol (PI)(34:3) have been detected in mature pollen, together with other 106 metabolites. Greater PI content was detected in N22 pollen regardless of the treatment, but not for Koshihikari pollen. In contrast, there was little detection for phosphoinositide in the single mature pollen grains in both cultivars. Our findings indicate that picoPPESI-MS analysis can efficiently identify the metabolites in intact single pollen. Since PI is a precursor of phosphoinositide that induces multiple signaling for pollen germination and tube growth, the active synthesis of PI(34:3) prior to germination may be closely associated with sustaining spikelet fertility even at high temperatures.

Indexed as

FertilityGerminationHeat-Shock ResponseHot TemperatureMetabolomicsOryzaPhosphatidylinositolsPollenSingle-Cell AnalysisPhosphatidylinositols

Identifiers

PMID32029818
PMCPMC7005239
OpenAlexW3005062270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.