Evidence map›Paper›PMID 32029782›Full record

ArticleScientific reports2020

Organelle inheritance and genome architecture variation in isogamous brown algae.

Ji Won Choi, Louis Graf, Akira F Peters, J Mark Cock, Koki Nishitsuji, Asuka Arimoto, Eiichi Shoguchi, Chikako Nagasato, Chang Geun Choi, Hwan Su Yoon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

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  12. EvoDevo · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Ji Won ChoiDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Korea.
Louis GrafDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Korea.
Akira F PetersBezhin Rosko, 29250, Santec, France.
J Mark CockAlgal Genetics Group, UMR 8227, CNRS, Sorbonne Universités, UPMC, Station Biologique Roscoff, CS 90074, 29688, Roscoff, France.
Koki NishitsujiMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan.
Asuka ArimotoMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan.
Eiichi ShoguchiMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan.
Chikako NagasatoMuroran Marine Station, Field Science Center for Northern Biosphere, Hokkaido University Muroran, 051-0013, Muroran, Hokkaido, Japan.
Chang Geun ChoiDepartment of Ecological Engineering, Pukyong National University, Busan, 48513, Korea.
Hwan Su YoonDepartment of Biological Sciences, Sungkyunkwan University, Suwon, 16419, Korea. hsyoon2011@skku.edu.
Sungkyunkwan University · KROkinawa Institute of Science and Technology Graduate University · JPCentre National de la Recherche Scientifique · FRHiroshima University · JPHokkaido University · JPPukyong National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the brown algal lineages, Ectocarpales species have isogamous fertilization in which male and female gametes are morphologically similar. In contrast, female gametes are much larger than male gametes in the oogamous species found in many other brown algal lineages. It has been reported that the plastids of isogamous species are biparentally inherited whereas the plastids of oogamous species are maternally inherited. In contrast, in both isogamous and oogamous species, the mitochondria are usually inherited maternally. To investigate whether there is any relationship between the modes of inheritance and organellar genome architecture, we sequenced six plastid genomes (ptDNA) and two mitochondrial genomes (mtDNA) of isogamous species from the Ectocarpales and compared them with previously sequenced organellar genomes. We found that the biparentally inherited ptDNAs of isogamous species presented distinctive structural rearrangements whereas maternally inherited ptDNAs of oogamous species showed no rearrangements. Our analysis permits the hypothesis that structural rearrangements in ptDNAs may be a consequence of the mode of inheritance.

Indexed as

Genome, MitochondrialGenome, PlastidInheritance PatternsDNA, MitochondrialEvolution, MolecularGene RearrangementGenomicsPhaeophyceaePlastidsSequence Analysis, DNADNA, Mitochondrial

Identifiers

PMID32029782
PMCPMC7005149
OpenAlexW3005334423

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.