Evidence map›Paper›PMID 32028973›Full record

ArticleMicrobial cell factories2020

High copy number and highly stable Escherichia coli-Bacillus subtilis shuttle plasmids based on pWB980.

XingYa Zhao, JianYong Xu, Ming Tan, Jie Zhen, WenJu Shu, ShiBin Yang, YanHe Ma, HongChen Zheng, Hui Song

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

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  15. The multifunctionality of expression systems inExperimental biology and medicine (Maywood, N.J.) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

XingYa ZhaoUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
JianYong XuIndustrial Enzymes National Engineering Laboratory, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin, 300308, China.
Ming TanIndustrial Enzymes National Engineering Laboratory, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin, 300308, China.
Jie ZhenIndustrial Enzymes National Engineering Laboratory, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin, 300308, China.
WenJu ShuUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
ShiBin YangUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
YanHe MaIndustrial Enzymes National Engineering Laboratory, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, No. 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin, 300308, China. ma_yanhe@tib.cas.cn.
HongChen ZhengUniversity of Chinese Academy of Sciences, Beijing, 100049, China. zheng_hc@tib.cas.cn.
Hui SongUniversity of Chinese Academy of Sciences, Beijing, 100049, China. song_h@tib.cas.cn.ORCID http://orcid.org/0000-0003-2642-1850
Chinese Academy of Sciences · CN

Funding

the National Natural Science Fund of China 31701534the Tianjin outstanding talent training program, the Tianjin Science & Technology Planning Project 14ZCZDSY00157the Tianjin outstanding talent training program, the Tianjin Science & Technology Planning Project 15PTCYSY00020Yantai Marine economy innovation development demonstration project YHCX-SW-L-201703
6 · The paper itself

Abstract

backgroundpWB980 derived from pUB110 is a promising expression vector in Bacillus for its high copy number and high stability. However, the low transformation rate of recombinant plasmids to the wild cells limited the application of it. On the basis of pWB980, constructing an E. coli-B. subtilis shuttle plasmid could facilitate the transformation rate to Bacillus cells. Because the insertion site for E. coli replication origin sequence (ori) is not unique in pWB980, in order to investigate the best insertion site, eight shuttle plasmids (pUC980-1 ~ pUC980-8) containing all possible insertion sites and directions were constructed.

resultsThe results showed that all the selected insertion sites could be used to construct shuttle plasmid but some sites required a specific direction. And different insertion sites led to different properties of the shuttle plasmids. The best shuttle plasmids pUC980-1 and pUC980-2, which showed copies more than 450 per cell and segregational stabilities up to 98%, were selected for heterologous expressions of an alkaline pectate lyase gene pelN, an alkaline protease spro1 and a pullulanase gene pulA11, respectively. The highest extracellular activities of PelN, Spro1 and PulA11 were up to 5200 U/mL, 21,537 U/mL and 504 U/mL correspondingly after 54 h, 60 h and 48 h fermentation in a 10 L fermentor. Notably, PelN and Spro1 showed remarkably higher yields in Bacillus than previous reports.

conclusionThe optimum ori insertion site was the upstream region of BA3-1 in pWB980 which resulted in shuttle plasmids with higher copy numbers and higher stabilities. The novel shuttle plasmids pUC980-1 and pUC980-2 will be promising expression vectors in B. subtilis. Moreover, the ori insertion mechanism revealed in this work could provide theoretical guidance for further studies of pWB980 and constructions of other shuttle plasmids.

Indexed as

Bacillus subtilisDNA Copy Number VariationsEscherichia coliGenetic VectorsGenomic InstabilityPlasmidsAlkaline pectate lyaseAlkaline proteaseBacillus subtilisExpression vectorspUC980Pullulanase

Identifiers

PMID32028973
PMCPMC7006159
OpenAlexW3007570494

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.