Evidence map›Paper›PMID 32026273›Full record

ArticleEnvironmental geochemistry and health2020

The comparison of transcriptomic response of green microalga Chlorella sorokiniana exposure to environmentally relevant concentration of cadmium(II) and 4-n-nonylphenol.

Na Ding, Lu Wang, Yuan Kang, Kesong Luo, Diya Zeng, Yu Bon Man, Qiuyun Zhang, Lixuan Zeng, Jiwen Luo, Feng Jiang

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Environmental geochemistry and health, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Na DingSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Lu WangSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Yuan KangSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China. kangyuan@m.scnu.edu.cn.ORCID http://orcid.org/0000-0003-3061-3070
Kesong LuoSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Diya ZengSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Yu Bon ManConsortium on Health, Environment, Education and Research (CHEER), and Department of Science and Environmental Studies, The Education University of Hong Kong, Hong Kong, People's Republic of China. ybman@eduhk.hk.
Qiuyun ZhangSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Lixuan ZengSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Jiwen LuoSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
Feng JiangSchool of Environment, South China Normal University, Higher Education Mega Center, Guangzhou, 510006, People's Republic of China.
South China Normal University · CNEducation University of Hong Kong · HK

Funding

51638005 National Natural Science Foundation of Chinathe Science and Technology Planning Project of Guangdong Province, China 2014A020216036
6 · The paper itself

Abstract

The transcriptomic response of green microalga Chlorella sorokiniana exposure to environmentally relevant concentration of cadmium(II) (Cd) and 4-n-nonylphenol (4-n-NP) was compared in the present study. Cd and 4-n-NP exposure showed a similar pattern of dys-regulated pathways. The photosystem was affected due to suppression of chlorophyll biosynthesis via down-regulation of Mg-protoporphyrin IX chelatase subunit ChlD (CHLD) and divinyl chlorophyllide a 8-vinyl-reductase (DVR) in Cd group and via down-regulation of DVR in 4-n-NP group. Furthermore, the reactive oxygen species (ROS) could be induced through down-regulation of solanesyl diphosphate synthase 1 (SPS1) and homogentisate phytyltransferase (HPT) in Cd group and via down-regulation of HPT in 4-n-NP group. Additionally, Cd and 4-n-NP would both cause the dys-regulation of carbohydrate metabolism and protein synthesis. On the other hand, there are some different responses or detoxification mechanism of C. sorokiniana to 4-n-NP stress compared to Cd exposure. The increased ROS would cause the DNA damage and protein destruction in Cd exposure group. Simultaneously, the RNA transcription was dys-regulated and a series of changes in gene expressions were observed. This included lipid metabolism, protein modification, and DNA repair, which involved in response of C. sorokiniana to Cd stress or detoxification of Cd. For 4-n-NP exposure, no effect on lipid metabolism and DNA repair was observed. The nucleotide metabolism including pyrimidine metabolism and purine metabolism was significantly up-regulated in the 4-n-NP exposure group, but not in the Cd exposure group. In addition, 4-n-NP would induce the ubiquitin-mediated proteolysis and proteasomal degradation to diminish the misfolded protein caused by ROS and down-regulation of heat shocking protein 40. In sum, the Cd and 4-n-NP could cause the same toxicological effects via the common pathways and possess similar detoxification mechanism. They also showed different responses in nucleotide metabolism, lipid metabolism, and DNA repair.

Indexed as

CadmiumCarbohydrate MetabolismChlorellaEcotoxicologyGene Expression RegulationInactivation, MetabolicLipid MetabolismMicroalgaePhenolsPhotosynthesisReactive Oxygen SpeciesTranscriptomeWater Pollutants, Chemical4-nonylphenolCadmiumPhenolsReactive Oxygen SpeciesWater Pollutants, Chemical4-n-nonylphenolCadmiumROSTranscriptomic response

Identifiers

PMID32026273
OpenAlexW3008613656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.