Evidence map›Paper›PMID 32025825›Full record

ArticleWorld journal of microbiology & biotechnology2020

Class I defensins (BraDef) from broccoli (Brassica oleracea var. italica) seeds and their antimicrobial activity.

Rubén D Pacheco-Cano, Rubén Salcedo-Hernández, Luz E Casados-Vázquez, Kazimierz Wrobel, Dennis K Bideshi, José E Barboza-Corona

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In one paragraph

Article in World journal of microbiology & biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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  6. Molecules (Basel, Switzerland) · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Rubén D Pacheco-CanoGraduate Program in Biosciences, Life Science Division, University of Guanajuato Campus Irapuato-Salamanca, Irapuato, 36500, Guanajuato, Mexico.
Rubén Salcedo-HernándezGraduate Program in Biosciences, Life Science Division, University of Guanajuato Campus Irapuato-Salamanca, Irapuato, 36500, Guanajuato, Mexico.
Luz E Casados-VázquezGraduate Program in Biosciences, Life Science Division, University of Guanajuato Campus Irapuato-Salamanca, Irapuato, 36500, Guanajuato, Mexico.
Kazimierz WrobelDepartment of Chemistry, University of Guanajuato Campus Guanajuato, Lascurain de Retana 5, Guanajuato, 36000, Guanajuato, Mexico.
Dennis K BideshiDepartment of Biological Sciences, California Baptist University, 8432 Magnolia Avenue, Riverside, CA, 92504, USA.
José E Barboza-CoronaGraduate Program in Biosciences, Life Science Division, University of Guanajuato Campus Irapuato-Salamanca, Irapuato, 36500, Guanajuato, Mexico. josebar@ugto.mx.ORCID http://orcid.org/0000-0002-0704-3076
Universidad de Guanajuato · MXUniversity of California, Riverside · US

Funding

Consejo Nacional de Ciencia y Tecnología (CONACyT, MEX) 258220Universidad de Guanajuato 158/2019
6 · The paper itself

Abstract

The objective of this study was to determine whether seeds of Brassica oleracea var. italica (i.e. broccoli, an edible plant) produce defensins that inhibit phytopathogenic fungi and pathogenic bacteria of clinical significance. Crude extracts obtained from broccoli seeds were fractioned by molecular exclusion techniques and analyzed by liquid chromatography-high-resolution mass spectrometry. Two peptides were identified, BraDef1 (10.68 kDa) and BraDef2 (9.9 kDa), which were categorized as Class I defensins based on (a) their primary structure, (b) the presence of four putative cysteine disulfide bridges, and (c) molecular modeling predictions. BraDef1 and BraDef2 show identities of, respectively, 98 and 71%, and 67 and 85%, with defensins from Brassica napus and Arabidopsis thaliana. BraDef (BraDef1 + BraDef2) disrupted membranes of Colletotrichum gloeosporioides and Alternaria alternata and also reduced hyphal growth of C. gloeosporioides by ~ 56% after 120 h of incubation. Pathogenic bacteria (Bacillus cereus 183, Listeria monocytogenes, Salmonella typhimurium, Pseudomonas aeruginosa, and Vibrio parahaemolitycus) were susceptible to BraDef, but probiotic bacteria such as Bifidobacterium animalis, Lactobacillus acidophilus, and Lactobacillus casei were not inhibited. To our knowledge, this is the first report of defensins present in seeds of B. oleracea var. italica (i.e. edible broccoli). Our findings suggest an applied value for BraDef1/BraDef2 in controlling phytopathogenic fungi and pathogenic bacteria of clinical significance.

Indexed as

Amino Acid SequenceAnti-Infective AgentsBacteriaBrassicaChromatography, LiquidDefensinsFungiMass SpectrometryMicrobial Sensitivity TestsModels, MolecularPlant ExtractsSeedsAnti-Infective AgentsDefensinsPlant ExtractsAntibacterialAntifungalBrassica oleracea var. italicaBroccoliDefensins

Identifiers

PMID32025825
OpenAlexW3004916335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.