Evidence map›Paper›PMID 32025654›Full record

ArticleJAMIA open2019

Implementing a hash-based privacy-preserving record linkage tool in the OneFlorida clinical research network.

Jiang Bian, Alexander Loiacono, Andrei Sura, Tonatiuh Mendoza Viramontes, Gloria Lipori, Yi Guo, Elizabeth Shenkman, William Hogan

Open access · goldAbstract read
In one paragraph

Article in JAMIA open, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
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  11. Review
  12. Privacy preserving record linkage for public health action: opportunities and challenges.Journal of the American Medical Informatics Association : JAMIA · 2024
    Article
  13. Article
  14. Hepatitis C Cascades: Data to Inform Hepatitis C Elimination in the United States.Public health reports (Washington, D.C. : 1974) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jiang BianHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Alexander LoiaconoHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Andrei SuraHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Tonatiuh Mendoza ViramontesHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Gloria LiporiClinical and Translational Institute, University of Florida, Gainesville, Florida, USA.
Yi GuoHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Elizabeth ShenkmanHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
William HoganHealth Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
University of Florida Health · USUniversity of Florida · US

Funding

Using social networks to map and evaluate team science across CTSA hubsUL1TR001427 · NCATS · UNIVERSITY OF FLORIDA · PI MITCHELL, DUANE A. · 2015 to 2024
$37.2M
NCATS NIH HHS UL1 TR001427
6 · The paper itself

Abstract

objectiveTo implement an open-source tool that performs deterministic privacy-preserving record linkage (RL) in a real-world setting within a large research network. MATERIALS AND

methodsWe learned 2 efficient deterministic linkage rules using publicly available voter registration data. We then validated the 2 rules' performance with 2 manually curated gold-standard datasets linking electronic health records and claims data from 2 sources. We developed an open-source Python-based tool-OneFL Deduper-that (1) creates seeded hash codes of combinations of patients' quasi-identifiers using a cryptographic one-way hash function to achieve privacy protection and (2) links and deduplicates patient records using a central broker through matching of hash codes with a high precision and reasonable recall.

resultsWe deployed the OneFl Deduper (https://github.com/ufbmi/onefl-deduper) in the OneFlorida, a state-based clinical research network as part of the national Patient-Centered Clinical Research Network (PCORnet). Using the gold-standard datasets, we achieved a precision of 97.25∼99.7% and a recall of 75.5%. With the tool, we deduplicated ∼3.5 million (out of ∼15 million) records down to 1.7 million unique patients across 6 health care partners and the Florida Medicaid program. We demonstrated the benefits of RL through examining different disease profiles of the linked cohorts.

conclusionsMany factors including privacy risk considerations, policies and regulations, data availability and quality, and computing resources, can impact how a RL solution is constructed in a real-world setting. Nevertheless, RL is a significant task in improving the data quality in a network so that we can draw reliable scientific discoveries from these massive data resources.

Indexed as

clinical research networkPCORnetprivacy-preserving record linkage

Identifiers

PMID32025654
PMCPMC6994009
OpenAlexW2979758753

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.