Evidence map›Paper›PMID 32024885›Full record

ArticleScientific reports2020

Synthetic analogues of 2-oxo acids discriminate metabolic contribution of the 2-oxoglutarate and 2-oxoadipate dehydrogenases in mammalian cells and tissues.

Artem V Artiukhov, Aneta Grabarska, Ewelina Gumbarewicz, Vasily A Aleshin, Thilo Kähne, Toshihiro Obata, Alexey V Kazantsev, Nikolay V Lukashev, Andrzej Stepulak, Alisdair R Fernie and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

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  12. Reverse and Forward Electron Flow-Induced HAntioxidants (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Artem V ArtiukhovFaculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.
Aneta GrabarskaDepartment of Biochemistry and Molecular Biology of Medical University of Lublin, Lublin, Poland.
Ewelina GumbarewiczDepartment of Biochemistry and Molecular Biology of Medical University of Lublin, Lublin, Poland.
Vasily A AleshinFaculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.
Thilo KähneInstitute of Experimental Internal Medicine, Otto-von-Guericke University Magdeburg, Magdeburg, Germany.
Toshihiro ObataMax Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
Alexey V KazantsevFaculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia.
Nikolay V LukashevFaculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia.
Andrzej StepulakDepartment of Biochemistry and Molecular Biology of Medical University of Lublin, Lublin, Poland.
Alisdair R FernieMax Planck Institute of Molecular Plant Physiology, Potsdam, Germany.
Victoria I BunikFaculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia. bunik@belozersky.msu.ru.
Lomonosov Moscow State University · RUMedical University of Lublin · PLMax Planck Institute of Molecular Plant Physiology · DEOtto-von-Guericke University Magdeburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biological significance of the DHTKD1-encoded 2-oxoadipate dehydrogenase (OADH) remains obscure due to its catalytic redundancy with the ubiquitous OGDH-encoded 2-oxoglutarate dehydrogenase (OGDH). In this work, metabolic contributions of OADH and OGDH are discriminated by exposure of cells/tissues with different DHTKD1 expression to the synthesized phosphonate analogues of homologous 2-oxodicarboxylates. The saccharopine pathway intermediates and phosphorylated sugars are abundant when cellular expressions of DHTKD1 and OGDH are comparable, while nicotinate and non-phosphorylated sugars are when DHTKD1 expression is order(s) of magnitude lower than that of OGDH. Using succinyl, glutaryl and adipoyl phosphonates on the enzyme preparations from tissues with varied DHTKD1 expression reveals the contributions of OADH and OGDH to oxidation of 2-oxoadipate and 2-oxoglutarate in vitro. In the phosphonates-treated cells with the high and low DHTKD1 expression, adipate or glutarate, correspondingly, are the most affected metabolites. The marker of fatty acid β-oxidation, adipate, is mostly decreased by the shorter, OGDH-preferring, phosphonate, in agreement with the known OGDH dependence of β-oxidation. The longest, OADH-preferring, phosphonate mostly affects the glutarate level. Coupled decreases in sugars and nicotinate upon the OADH inhibition link the perturbation in glucose homeostasis, known in OADH mutants, to the nicotinate-dependent NAD metabolism.

Indexed as

AdipatesAnimalsEnzyme AssaysHumansKetoglutarate Dehydrogenase ComplexKetone OxidoreductasesLysineMaleMCF-7 CellsNiacinOxidation-ReductionPhosphorylationRatsRNA-SeqAdipatesalpha-ketoadipic acidDHTKD1 protein, humanDhtkd1 protein, ratKetoglutarate Dehydrogenase ComplexKetone OxidoreductasesLysineNiacinsaccharopine

Identifiers

PMID32024885
PMCPMC7002488
OpenAlexW3004442384

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.