Evidence map›Paper›PMID 32024661›Full record

ArticleGenome research2020

The full-length transcriptome of

Nathan P Roach, Norah Sadowski, Amelia F Alessi, Winston Timp, James Taylor, John K Kim

Abstract read
In one paragraph

Article in Genome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. CGC1, a new reference genome forGenome research · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nathan P RoachDepartment of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.ORCID 0000-0001-9353-4615
Norah SadowskiDepartment of Biomedical Engineering, Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, Maryland 21218, USA.ORCID 0000-0002-2982-3161
Amelia F AlessiDepartment of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Winston TimpDepartment of Biomedical Engineering, Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, Maryland 21218, USA.ORCID 0000-0003-2083-6027
James TaylorDepartment of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.ORCID 0000-0001-5079-840X
John K KimDepartment of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
Direct nanopore detection of modified RNA to probe structure and dynamicsR01HG010538 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI TIMP, WINSTON GEORGE · 2019 to 2022
$3.1M
Formation and Function of Glycolytic Bodies in HypoxiaR01GM129301 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KIM, JOHN · 2018 to 2021
$1.9M
NHGRI NIH HHS R01 HG010538NIGMS NIH HHS R01 GM129301NIGMS NIH HHS T32 GM007231
6 · The paper itself

Abstract

Current transcriptome annotations have largely relied on short read lengths intrinsic to the most widely used high-throughput cDNA sequencing technologies. For example, in the annotation of the

Indexed as

Alternative SplicingAnimalsCaenorhabditis elegansExonsGene Expression Regulation, DevelopmentalGenomeMolecular Sequence AnnotationRNA, MessengerSequence Analysis, RNATranscriptomeRNA, Messenger

Identifiers

PMID32024661
PMCPMC7050520

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.