Evidence map›Paper›PMID 32024005›Full record

ReviewInternational journal of molecular sciences2020

Bioinformatics for Renal and Urinary Proteomics: Call for Aggrandization.

Piby Paul, Vimala Antonydhason, Judy Gopal, Steve W Haga, Nazim Hasan, Jae-Wook Oh

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Expression analysis of human glioma susceptibility gene andAnnals of translational medicine · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Piby PaulSt. Jude Childrens Cancer Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Vimala AntonydhasonDepartment of Microbiology and Immunology, Institute for Biomedicine, Gothenburg University, 413 90 Gothenburg, Sweden.
Judy GopalDepartment of Environmental Health Sciences, Konkuk University, Seoul 143-701, Korea.ORCID 0000-0003-0090-5160
Steve W HagaDepartment of Computer Science and Engineering, National Sun Yat Sen University, Kaohsiung 804, Taiwan.
Nazim HasanDepartment of Chemistry, Faculty of Science, Jazan University, P.O. Box 114, Jazan 45142, Saudi Arabia.
Jae-Wook OhDepartment of Stem Cell and Regenerative Biotechnology, Konkuk University, Seoul 05029, Korea.ORCID 0000-0003-2439-0499

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clinical sampling of urine is noninvasive and unrestricted, whereby huge volumes can be easily obtained. This makes urine a valuable resource for the diagnoses of diseases. Urinary and renal proteomics have resulted in considerable progress in kidney-based disease diagnosis through biomarker discovery and treatment. This review summarizes the bioinformatics tools available for this area of proteomics and the milestones reached using these tools in clinical research. The scant research publications and the even more limited bioinformatic tool options available for urinary and renal proteomics are highlighted in this review. The need for more attention and input from bioinformaticians is highlighted, so that progressive achievements and releases can be made. With just a handful of existing tools for renal and urinary proteomic research available, this review identifies a gap worth targeting by protein chemists and bioinformaticians. The probable causes for the lack of enthusiasm in this area are also speculated upon in this review. This is the first review that consolidates the bioinformatics applications specifically for renal and urinary proteomics.

Indexed as

BiomarkersComputational BiologyHumansKidneyProteomicsUrineUrologic DiseasesBiomarkersbioinformaticsdatabasesomicsrenaltoolsurinary proteomics

Identifiers

PMID32024005
PMCPMC7038205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.