Evidence map›Paper›PMID 32023980›Full record

ArticleDiagnostics (Basel, Switzerland)2020

Assessment of Renal Osteodystrophy via Computational Analysis of Label-free Raman Detection of Multiple Biomarkers.

Marian Manciu, Mario Cardenas, Kevin E Bennet, Avudaiappan Maran, Michael J Yaszemski, Theresa A Maldonado, Diana Magiricu, Felicia S Manciu

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Direct monitoring of single-cell response to biomaterials by Raman spectroscopy.Journal of materials science. Materials in medicine · 2021
    Article
  5. Response of the ENPP1-Deficient Skeletal Phenotype to Oral Phosphate Supplementation and/or Enzyme Replacement Therapy: Comparative Studies in Humans and Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marian ManciuDepartment of Physics, University of Texas at El Paso, El Paso, TX 79968, USA.
Mario CardenasDepartment of Physics, University of Texas at El Paso, El Paso, TX 79968, USA.
Kevin E BennetDivision of Engineering and Department of Neurologic Surgery, Mayo Clinic, Rochester, MN 55905, USA.
Avudaiappan MaranDepartment of Orthopedic Surgery and Biomaterials and Histomorphometry Core Laboratory, Mayo Clinic, Rochester, MN 55905, USA.
Michael J YaszemskiDepartment of Orthopedic Surgery and Biomaterials and Histomorphometry Core Laboratory, Mayo Clinic, Rochester, MN 55905, USA.
Theresa A MaldonadoDepartment of Electrical and Computer Engineering, University of Texas at El Paso, El Paso, TX 79968, USA.
Diana MagiricuTouro College of Osteopathic Medicine, New York, NY 10027, USA.
Felicia S ManciuDepartment of Physics, University of Texas at El Paso, El Paso, TX 79968, USA.

Funding

NIH HHS NIH NIMHHD 2G12MD007592
6 · The paper itself

Abstract

Accurate clinical evaluation of renal osteodystrophy (ROD) is currently accomplished using invasive in vivo transiliac bone biopsy, followed by in vitro histomorphometry. In this study, we demonstrate that an alternative method for ROD assessment is through a fast, label-free Raman recording of multiple biomarkers combined with computational analysis for predicting the minimally required number of spectra for sample classification at defined accuracies. Four clinically relevant biomarkers: the mineral-to-matrix ratio, the carbonate-to-matrix ratio, phenylalanine, and calcium contents were experimentally determined and simultaneously considered as input to a linear discriminant analysis (LDA). Additionally, sample evaluation was performed with a linear support vector machine (LSVM) algorithm, with a 300 variable input. The computed probabilities based on a single spectrum were only marginally different (~80% from LDA and ~87% from LSVM), both providing an unacceptable classification power for a correct sample assignment. However, the Type I and Type II assignment errors confirm that a relatively small number of independent spectra (7 spectra for Type I and 5 spectra for Type II) is necessary for a

Indexed as

artificial intelligencediagnostic deviceslabel-free detectionmultiple biomarkersRaman spectroscopyrenal osteodystrophystatistical analysis

Identifiers

PMID32023980
PMCPMC7168928

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.