Evidence map›Paper›PMID 32020430›Full record

ArticleMolecular biology reports2020

Improved protocols for BAC insert DNA isolation, BAC end sequencing and FISH for construction of BAC based physical map of genes on the chromosomes.

Ravindra Kumar, Vishwamitra Singh Baisvar, Basdeo Kushwaha, S Murali, Vijay Kumar Singh

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Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. BAC-FISH Based Physical Map of Endangered CatfishInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ravindra Kumar *Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P. O. Dilkusha, Lucknow, Uttar Pradesh, 226 002, India.
Vishwamitra Singh Baisvar *Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P. O. Dilkusha, Lucknow, Uttar Pradesh, 226 002, India.
Basdeo KushwahaMolecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P. O. Dilkusha, Lucknow, Uttar Pradesh, 226 002, India. basdeo.scientist@gmail.com.
S MuraliMolecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P. O. Dilkusha, Lucknow, Uttar Pradesh, 226 002, India.
Vijay Kumar SinghMolecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Canal Ring Road, P. O. Dilkusha, Lucknow, Uttar Pradesh, 226 002, India.
National Bureau of Fish Genetic Resources · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial artificial chromosome (BAC) library is an important genomic resource useful in targeted marker development, positional cloning, physical mapping and a substrate for genome sequencing for better understanding the genome organization of a species. The present manuscript elucidates the improvement in protocols for economical and efficient BAC insert DNA isolation, BAC end sequencing and FISH for physical localization on the metaphase chromosome complements. BAC clones of Clarias magur, maintained in 384-well plate format in our laboratory, were used in this study. The protocols gave consistent and efficient results. We use routinely these protocols for BAC insert DNA extraction, generating end sequence data of the clone and constructing DNA probes to hybridize on the metaphase spreads of C. magur using FISH for physical their localization.

Indexed as

Chromosomes, Artificial, BacterialIn Situ Hybridization, FluorescencePhysical Chromosome MappingSequence Analysis, DNAComputational BiologyDNAGene LibrarySoftwareDNABAC clonesBAC DNABAC end sequencingClarias magurFISH

Identifiers

PMID32020430
OpenAlexW3005311058

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.