Evidence map›Paper›PMID 32019976›Full record

ArticleScientific reports2020

Streptomyces sp. VN1, a producer of diverse metabolites including non-natural furan-type anticancer compound.

Hue Thi Nguyen, Anaya Raj Pokhrel, Chung Thanh Nguyen, Van Thuy Thi Pham, Dipesh Dhakal, Haet Nim Lim, Hye Jin Jung, Tae-Su Kim, Tokutaro Yamaguchi, Jae Kyung Sohng

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 60 citations in OpenAlex.

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  11. Undescribed Metabolites from an ActinobacteriaMolecules (Basel, Switzerland) · 2022
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  16. Lobophorin Producing EndophyticFrontiers in microbiology · 2022
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  18. Biosynthetic Potential ofAntibiotics (Basel, Switzerland) · 2021
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  19. Review
  20. Draft Genome Sequence ofMicrobiology resource announcements · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Hue Thi NguyenDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Anaya Raj PokhrelDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.ORCID http://orcid.org/0000-0002-8740-765X
Chung Thanh NguyenDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Van Thuy Thi PhamDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Dipesh DhakalDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.ORCID http://orcid.org/0000-0002-2492-8263
Haet Nim LimDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Hye Jin JungDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Tae-Su KimDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.
Tokutaro YamaguchiDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea.ORCID http://orcid.org/0000-0002-5160-7174
Jae Kyung SohngDepartment of Life Science and Biochemical Engineering, SunMoon University, 70 Sunmoon-ro 221, Tangjeong-myeon, Asan-si, Chungnam, 31460, Republic of Korea. sohng@sunmoon.ac.kr.
Sun Moon University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptomyces sp. VN1 was isolated from the coastal region of Phu Yen Province (central Viet Nam). Morphological, physiological, and whole genome phylogenetic analyses suggested that strain Streptomyces sp. VN1 belonged to genus Streptomyces. Whole genome sequencing analysis showed its genome was 8,341,703 base pairs in length with GC content of 72.5%. Diverse metabolites, including cinnamamide, spirotetronate antibiotic lobophorin A, diketopiperazines cyclo-L-proline-L-tyrosine, and a unique furan-type compound were isolated from Streptomyces sp. VN1. Structures of these compounds were studied by HR-Q-TOF ESI/MS/MS and 2D NMR analyses. Bioassay-guided purification yielded a furan-type compound which exhibited in vitro anticancer activity against AGS, HCT116, A375M, U87MG, and A549 cell lines with IC

Indexed as

A549 CellsAnti-Bacterial AgentsAntineoplastic AgentsBiological AssayBiological ProductsCell Line, TumorFuransGenome, BacterialHCT116 CellsHumansMultigene FamilyPhylogenyStreptomycesAnti-Bacterial AgentsAntineoplastic AgentsBiological ProductsfuranFurans

Identifiers

PMID32019976
PMCPMC7000394
OpenAlexW3005093537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.