Evidence map›Paper›PMID 32015457›Full record

ArticleThe pharmacogenomics journal2020

Genome-wide transcriptomics leads to the identification of deregulated genes after deferasirox therapy in low-risk MDS patients.

Jesús María Hernández Sánchez, Eva Lumbreras, María Díez-Campelo, Teresa González, Diego Alonso López, María Abáigar, Mónica Del Rey, Ana África Martín, Raquel de Paz, Sara Erquiaga and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in The pharmacogenomics journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Jesús María Hernández SánchezIBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
Eva LumbrerasIBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
María Díez-CampeloServicio de Hematología, Hospital Universitario, Salamanca, Spain.ORCID http://orcid.org/0000-0002-1467-6779
Teresa GonzálezIBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
Diego Alonso LópezUnidad de Bioinformática, Centro de Investigación del Cáncer (CSIC-USAL), Salamanca, Spain.ORCID http://orcid.org/0000-0003-1015-9923
María AbáigarIBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
Mónica Del ReyIBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
Ana África MartínServicio de Hematología, Hospital Universitario, Salamanca, Spain.
Raquel de PazServicio de Hematología, Hospital Universitario La Paz, Madrid, Spain.
Sara ErquiagaServicio de Hematología, Hospital Universitario de Cruces, Barakaldo, Vizcaya, Spain.
Beatriz ArrizabalagaServicio de Hematología, Hospital Universitario de Cruces, Barakaldo, Vizcaya, Spain.
Jesús María Hernández-Rivas *IBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain.
Ana Eugenia Rodríguez Vicente *IBSAL. IBMCC, CIC Universidad de Salamanca-CSIC, Salamanca, Spain. anaerv@hotmail.com.ORCID http://orcid.org/0000-0001-6516-2172
Universidad de Salamanca · ESComplejo Hospitalario de Salamanca · ESHospital de Cruces · ESCentro de Investigación del Cáncer · ESHospital Universitario La Paz · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The iron chelator deferasirox is widely used in patients with iron overload. Patients with low-grade myelodysplastic syndromes (MDS) get transfusion dependency and need to be treated with deferasirox to avoid iron overload. Moreover, in some patients an increase in both erythroid and platelets have been observed after deferasirox therapy. However, the mechanisms involved in these clinical findings are poorly understood. The aim of this work was to analyze, in patients treated with deferasirox, the changes in the gene-expression profile after receiving the treatment. A total of 15 patients with the diagnosis of low-grade MDS were studied. Microarrays were carried out in RNA from peripheral blood before and after 14 weeks of deferasirox therapy. Changes in 1457 genes and 54 miRNAs were observed: deferasirox induced the downregulation of genes related to the Nf kB pathway leading of an overall inactivation of this pathway. In addition, the iron chelator also downregulated gamma interferon. Altogether these changes could be related to the improvement of erythroid response observed in these patients after therapy. Moreover, the inhibition of NFE2L2/NRF2, which was predicted in silico, could be playing a critical role in the reduction of reactive oxygen species (ROS). Of note, miR-125b, overexpressed after deferasirox treatment, could be involved in the reduced inflammation and increased hematopoiesis observed in the patients after treatment. In summary this study shows, for the first time, the mechanisms that could be governing deferasirox impact in vivo.

Indexed as

Gene Expression ProfilingAgedAged, 80 and overDeferasiroxErythropoiesisFemaleGene Expression RegulationGene Regulatory NetworksGenome-Wide Association StudyHumansIron Chelating AgentsMaleMiddle AgedMyelodysplastic SyndromesOligonucleotide Array Sequence AnalysisPharmacogeneticsDeferasiroxIron Chelating Agents

Identifiers

PMID32015457
OpenAlexW3003243690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.