Evidence map›Paper›PMID 32015087›Full record

ArticleLife science alliance2020

Retrograde trafficking of Argonaute 2 acts as a rate-limiting step for de novo miRNP formation on endoplasmic reticulum-attached polysomes in mammalian cells.

Mainak Bose, Susanta Chatterjee, Yogaditya Chakrabarty, Bahnisikha Barman, Suvendra N Bhattacharyya

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Challenging Cellular Homeostasis: Spatial and Temporal Regulation of miRNAs.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. mt tRFs, New Players in MELAS Disease.Frontiers in physiology · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. MicroRNAs: From Mechanism to Organism.Frontiers in cell and developmental biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mainak BoseRNA Biology Research Laboratory, Molecular Genetics Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology, Kolkata, India.
Susanta ChatterjeeRNA Biology Research Laboratory, Molecular Genetics Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology, Kolkata, India.
Yogaditya ChakrabartyRNA Biology Research Laboratory, Molecular Genetics Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology, Kolkata, India.ORCID https://orcid.org/0000-0002-3230-9251
Bahnisikha BarmanRNA Biology Research Laboratory, Molecular Genetics Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology, Kolkata, India.ORCID https://orcid.org/0000-0002-7677-1595
Suvendra N BhattacharyyaRNA Biology Research Laboratory, Molecular Genetics Division, Council of Scientific and Industrial Research-Indian Institute of Chemical Biology, Kolkata, India suvendra@iicb.res.in.ORCID https://orcid.org/0000-0001-9697-3824
Indian Institute of Chemical Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

microRNAs are short regulatory RNAs in metazoan cells. Regulation of miRNA activity and abundance is evident in human cells where availability of target messages can influence miRNA biogenesis by augmenting the Dicer1-dependent processing of precursors to mature microRNAs. Requirement of subcellular compartmentalization of Ago2, the key component of miRNA repression machineries, for the controlled biogenesis of miRNPs is reported here. The process predominantly happens on the polysomes attached with the endoplasmic reticulum for which the subcellular Ago2 trafficking is found to be essential. Mitochondrial tethering of endoplasmic reticulum and its interaction with endosomes controls Ago2 availability. In cells with depolarized mitochondria, miRNA biogenesis gets impaired, which results in lowering of de novo-formed mature miRNA levels and accumulation of miRNA-free Ago2 on endosomes that fails to interact with Dicer1 and to traffic back to endoplasmic reticulum for de novo miRNA loading. Thus, mitochondria by sensing the cellular context regulates Ago2 trafficking at the subcellular level, which acts as a rate-limiting step in miRNA biogenesis process in mammalian cells.

Indexed as

AnimalsArgonaute ProteinsDEAD-box RNA HelicasesEndoplasmic ReticulumFibroblastsGTP PhosphohydrolasesHEK293 CellsHumansIntracellular MembranesMiceMicroRNAsMitochondriaMultivesicular BodiesPolyribosomesProtein TransportRibonuclease IIIAGO2 protein, humanAgo2 protein, mouseArgonaute ProteinsDEAD-box RNA HelicasesDICER1 protein, humanGTP PhosphohydrolasesMfn2 protein, mouseMicroRNAsMIRN122 microRNA, humanRibonuclease IIIRibonucleoproteins, Small CytoplasmicRNA, Messenger

Identifiers

PMID32015087
PMCPMC6998040
OpenAlexW3004240850

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.