Evidence map›Paper›PMID 32014431›Full record

ArticleExperimental hematology2020

Aging-associated decrease in the histone acetyltransferase KAT6B is linked to altered hematopoietic stem cell differentiation.

Eraj Shafiq Khokhar, Sneha Borikar, Elizabeth Eudy, Tim Stearns, Kira Young, Jennifer J Trowbridge

Open access · bronzeAbstract read
In one paragraph

Article in Experimental hematology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
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  3. Article
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  9. Review
  10. Article
  11. Hematopoietic Stem Cells and the Immune System in Development and Aging.International journal of molecular sciences · 2023
    Review
  12. Functional genomics of inflamm-aging and immunosenescence.Briefings in functional genomics · 2022
    Review
  13. Metabolic Regulation of Stem Cells in Aging.Current stem cell reports · 2021
    Article
  14. Review
  15. Regulation of stress-induced hematopoiesis.Current opinion in hematology · 2020
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Eraj Shafiq KhokharGraduate School of Biomedical Science and Engineering, University of Maine, Orono, ME, USA; The Jackson Laboratory, Bar Harbor, ME, USA.
Sneha BorikarThe Jackson Laboratory, Bar Harbor, ME, USA.
Elizabeth EudyThe Jackson Laboratory, Bar Harbor, ME, USA.
Tim StearnsThe Jackson Laboratory, Bar Harbor, ME, USA.
Kira YoungThe Jackson Laboratory, Bar Harbor, ME, USA.
Jennifer J TrowbridgeGraduate School of Biomedical Science and Engineering, University of Maine, Orono, ME, USA; The Jackson Laboratory, Bar Harbor, ME, USA. Electronic address: jennifer.trowbridge@jax.org.
Jackson Laboratory · USUniversity of Maine · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Translational CoreP30AG038070 · NIA · JACKSON LABORATORY · PI John Matthew Mahoney · 2010 to 2026
$19.3M
Developing Effective Approaches to Extend Hematopoietic Healthspan by Targeting Cell-Extrinsic and Cell-Intrinsic Alterations at Middle AgeR01DK118072 · NIDDK · JACKSON LABORATORY · PI Jennifer Jean Trowbridge · 2018 to 2026
$4.2M
REPRODUCTIVE BIOLOGYT32HD007065 · NICHD · JACKSON LABORATORY · PI BRAUN, ROBERT E · 1985 to 2020
$2.6M
Aging-induced Alterations in the Microenvironment as Drivers of Myeloid Lineage SkewingR56DK112947 · NIDDK · JACKSON LABORATORY · PI TROWBRIDGE, JENNIFER JEAN · 2017 to 2017
$150k
NCI NIH HHS P30 CA034196NIA NIH HHS P30 AG038070NICHD NIH HHS T32 HD007065NIDDK NIH HHS R01 DK118072NIDDK NIH HHS R56 DK112947
6 · The paper itself

Abstract

Aged hematopoietic stem cells (HSCs) undergo biased lineage priming and differentiation toward production of myeloid cells. A comprehensive understanding of gene regulatory mechanisms causing HSC aging is needed to devise new strategies to sustainably improve immune function in aged individuals. Here, a focused short hairpin RNA screen of epigenetic factors reveals that the histone acetyltransferase Kat6b regulates myeloid cell production from hematopoietic progenitor cells. Within the stem and progenitor cell compartment, Kat6b is highly expressed in long-term (LT)-HSCs and is significantly decreased with aging at the transcript and protein levels. Knockdown of Kat6b in young LT-HSCs causes skewed production of myeloid cells at the expense of erythroid cells both in vitro and in vivo. Transcriptome analysis identifies enrichment of aging and macrophage-associated gene signatures alongside reduced expression of self-renewal and multilineage priming signatures. Together, our work identifies KAT6B as a novel epigenetic regulator of hematopoietic differentiation and a target to improve aged immune function.

Indexed as

Cell DifferentiationGene Expression Regulation, EnzymologicAgingAnimalsEpigenesis, GeneticErythroid CellsGene Expression ProfilingGene Knockout TechniquesHistone AcetyltransferasesMaleMiceMice, TransgenicMyeloid Progenitor CellsTranscriptomeHistone AcetyltransferasesKat6b protein, mouse

Identifiers

PMID32014431
PMCPMC7179256
OpenAlexW3003709618

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.