Evidence map›Paper›PMID 32013121›Full record

ArticleCancers2020

Development of a Precision Medicine Workflow in Hematological Cancers, Aalborg University Hospital, Denmark.

Julie S Bødker, Mads Sønderkær, Charles Vesteghem, Alexander Schmitz, Rasmus F Brøndum, Mia Sommer, Anne S Rytter, Marlene M Nielsen, Jakob Madsen, Paw Jensen and 7 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Observational
  2. Overexpression ofInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Julie S BødkerDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Mads SønderkærDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Charles VesteghemDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Alexander SchmitzDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Rasmus F BrøndumDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Mia SommerDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Anne S RytterDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Marlene M NielsenDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Jakob MadsenDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Paw JensenDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Inge S PedersenDepartment of Clinical Medicine, Aalborg University, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Lykke GrubachDepartment of Pathology, Aalborg University Hospital, Ladegårdsgade 3, DK-9000 Aalborg, Denmark.
Marianne T SeverinsenDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Anne S RougDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Tarec C El-GalalyDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Karen DybkærDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Martin BøgstedDepartment of Haematology, Clinical Cancer Research Centre, Aalborg University Hospital, Sdr. Skovvej 15, DK-9000 Aalborg, Denmark.
Aalborg University Hospital · DK

Funding

Kræftens Bekæmpelse R130-A8346-15-S38
6 · The paper itself

Abstract

Within recent years, many precision cancer medicine initiatives have been developed. Most of these have focused on solid cancers, while the potential of precision medicine for patients with hematological malignancies, especially in the relapse situation, are less elucidated. Here, we present a demographic unbiased and observational prospective study at Aalborg University Hospital Denmark, referral site for 10% of the Danish population. We developed a hematological precision medicine workflow based on sequencing analysis of whole exome tumor DNA and RNA. All steps involved are outlined in detail, illustrating how the developed workflow can provide relevant molecular information to multidisciplinary teams. A group of 174 hematological patients with progressive disease or relapse was included in a non-interventional and population-based study, of which 92 patient samples were sequenced. Based on analysis of small nucleotide variants, copy number variants, and fusion transcripts, we found variants with potential and strong clinical relevance in 62% and 9.5% of the patients, respectively. The most frequently mutated genes in individual disease entities were in concordance with previous studies. We did not find tumor mutational burden or micro satellite instability to be informative in our hematologic patient cohort.

Indexed as

bioinformatics workflowhematologynext generation sequencingprecision medicinesomatic cancer variantsvariant interpretation

Identifiers

PMID32013121
PMCPMC7073219
OpenAlexW3003281710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.