Evidence map›Paper›PMID 32012160›Full record

ArticlePLoS computational biology2020

Optimality of sparse olfactory representations is not affected by network plasticity.

Collins Assisi, Mark Stopfer, Maxim Bazhenov

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A spiking neural program for sensorimotor control during foraging in flying insects.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Collins AssisiDivision of Biology, Indian Institute of Science Education and Research, Pune, India.ORCID 0000-0003-0108-582X
Mark StopferNICHD, National Institutes of Health, Bethesda, Maryland, United States of America.
Maxim BazhenovDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, University of California San Diego, La Jolla, California, United States of America.ORCID 0000-0002-1936-0570
Indian Institute of Science Education and Research Pune · INNational Institutes of Health · USUniversity of California System · US

Funding

Sensory Coding by Ensembles of Neurons.ZIAHD008760 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI STOPFER, MARK A · 2009 to 2025
$26.3M
CRCNS: Multiple roles of inhibition in the olfactory systemR01DC012943 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAZHENOV, MAKSIM V · 2012 to 2016
$1.3M
DBT-Wellcome Trust India Alliance IA/I/11/2500290NIDCD NIH HHS R01 DC012943Wellcome Trust
6 · The paper itself

Abstract

The neural representation of a stimulus is repeatedly transformed as it moves from the sensory periphery to deeper layers of the nervous system. Sparsening transformations are thought to increase the separation between similar representations, encode stimuli with great specificity, maximize storage capacity of associative memories, and provide an energy efficient instantiation of information in neural circuits. In the insect olfactory system, odors are initially represented in the periphery as a combinatorial code with relatively simple temporal dynamics. Subsequently, in the antennal lobe this representation is transformed into a dense and complex spatiotemporal activity pattern. Next, in the mushroom body Kenyon cells (KCs), the representation is dramatically sparsened. Finally, in mushroom body output neurons (MBONs), the representation takes on a new dense spatiotemporal format. Here, we develop a computational model to simulate this chain of olfactory processing from the receptor neurons to MBONs. We demonstrate that representations of similar odorants are maximally separated, measured by the distance between the corresponding MBON activity vectors, when KC responses are sparse. Sparseness is maintained across variations in odor concentration by adjusting the feedback inhibition that KCs receive from an inhibitory neuron, the Giant GABAergic neuron. Different odor concentrations require different strength and timing of feedback inhibition for optimal processing. Importantly, as observed in vivo, the KC-MBON synapse is highly plastic, and, therefore, changes in synaptic strength after learning can change the balance of excitation and inhibition, potentially leading to changes in the distance between MBON activity vectors of two odorants for the same level of KC population sparseness. Thus, what is an optimal degree of sparseness before odor learning, could be rendered sub-optimal post learning. Here, we show, however, that synaptic weight changes caused by spike timing dependent plasticity increase the distance between the odor representations from the perspective of MBONs. A level of sparseness that was optimal before learning remains optimal post-learning.

Indexed as

Neuronal PlasticitySmellAnimalsHumansOlfactory Pathways

Identifiers

PMID32012160
PMCPMC7028362
OpenAlexW3004187753

What OpenQuestion holds

Textmetadata
LicenceCC0
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.