Evidence map›Paper›PMID 32011704›Full record

ArticlePathogens and disease2019

Nonspecific toxicities of Streptococcus pyogenes and Staphylococcus aureus dCas9 in Chlamydia trachomatis.

Wurihan Wurihan, Yehong Huang, Alec M Weber, Xiang Wu, Huizhou Fan

Open access · bronzeAbstract read
In one paragraph

Article in Pathogens and disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Advances in genetic manipulation ofFrontiers in immunology · 2023
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Robust Heat Shock Response inFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Wurihan WurihanDepartment of Pharmacology, Rutgers University Robert Wood Johnson Medical School, 675 Hoes Lane West, Piscataway, New Jersey 08854, USA.
Yehong HuangDepartment of Pharmacology, Rutgers University Robert Wood Johnson Medical School, 675 Hoes Lane West, Piscataway, New Jersey 08854, USA.
Alec M WeberDepartment of Pharmacology, Rutgers University Robert Wood Johnson Medical School, 675 Hoes Lane West, Piscataway, New Jersey 08854, USA.
Xiang WuDepartment of Parasitology, Central South University Xiangya Medical School, 110 Xiangya Road, Changsha, Hunan 410013, China.
Huizhou FanDepartment of Pharmacology, Rutgers University Robert Wood Johnson Medical School, 675 Hoes Lane West, Piscataway, New Jersey 08854, USA.
Rutgers, The State University of New Jersey · USCentral South University · CN

Funding

GrgA:a Multifunctional Transcription Factor that Control Chlamydial Gene ExpressionR21AI140167 · NIAID · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI FAN, HUIZHOU · 2019 to 2020
$435k
GrgA: Key Regulator of Chlamydial Physiology and potential Antichlamydial TargetR21AI122034 · NIAID · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI FAN, HUIZHOU · 2016 to 2017
$414k
NIAID NIH HHS R21 AI122034NIAID NIH HHS R21 AI140167
6 · The paper itself

Abstract

Chlamydiae are common, important pathogens for humans and animals alike. Despite recent advancement in genetics, scientists are still searching for efficient tools to knock out or knock down the expression of chromosomal genes. We attempted to adopt a dCas9-based CRISPR interference (CRISPRi) technology to conditionally knock down gene expression in Chlamydia trachomatis using an anhydrotetracycline (ATC)-inducible expression system. Surprisingly, expression of the commonly used Streptococcus pyogenes dCas9 in C. trachomatis causes strong inhibition in the absence of any guide RNA (gRNA). Staphylococcus aureus dCas9 also shows strong toxicity in the presence of only an empty gRNA scaffold. Toxicity of the S. pyogenes dCas9 is readily observed with as little as 0.2 nM ATC. Growth inhibition by S. aureus dCas9 is evident starting at 1.0 nM ATC. In contrast, C. trachomatis growth was not affected by methionine-tRNA ligase overexpression induced with 10 nM ATC. We conclude that S. pyogenes and S. aureus dCas9 proteins in their current forms have limited utility for chlamydial research and suggest strategies to overcome this problem.

Indexed as

CRISPR-Cas SystemsChlamydia trachomatisRNA, Guide, CRISPR-Cas SystemsStaphylococcus aureusStreptococcus pyogenesRNA, Guide, CRISPR-Cas SystemsChlamydiaconditional gene knock-downCRISPRCRISPRidCas9essential gene knock-downtoxicity

Identifiers

PMID32011704
PMCPMC7040368
OpenAlexW3005495064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.