Evidence map›Paper›PMID 32011131›Full record

ArticleBiochemistry2020

Opposites Attract:

Joy M Cote, Cody J S Hecht, Kaelan R Patel, Carlos A Ramirez-Mondragon, Yuk Y Sham, Erika A Taylor

Abstract read
In one paragraph

Article in Biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Joy M CoteDepartment of Chemistry, Wesleyan University, Middletown, Connecticut 06459, United States.ORCID 0000-0002-2570-267X
Cody J S HechtDepartment of Chemistry, Wesleyan University, Middletown, Connecticut 06459, United States.
Kaelan R PatelDepartment of Integrative Biology and Physiology, Medical School, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Carlos A Ramirez-MondragonBioinformatics and Computational Biology Program, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Yuk Y ShamDepartment of Integrative Biology and Physiology, Medical School, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Erika A TaylorDepartment of Chemistry, Wesleyan University, Middletown, Connecticut 06459, United States.ORCID 0000-0001-5598-640X

Funding

DOCTORAL STUDIES IN MOLECULAR BIOPHYSICST32GM008271 · NIGMS · WESLEYAN UNIVERSITY · PI BEVERIDGE, DAVID LEWIS · 1988 to 2015
$1.8M
Inhibition of HeptosyltransferaseI for the treatment of Gram-negative bacterial infectionR15AI119907 · NIAID · WESLEYAN UNIVERSITY · PI TAYLOR, ERIKA A · 2015 to 2015
$493k
NIAID NIH HHS R15 AI119907NIGMS NIH HHS T32 GM008271
6 · The paper itself

Abstract

Gram-negative bacterial viability is greatly reduced by the disruption of heptose sugar addition during the biosynthesis of lipopolysaccharide (LPS), an important bacterial outer membrane component. Heptosyltransferase I (HepI), a member of the GT-B structural subclass of glycosyltransferases, is therefore an essential enzyme for the biosynthesis of the LPS. The disruption of HepI also increases the susceptibility of bacteria to hydrophobic antibiotics, making HepI a potential target for drug development. In this work, the structural and dynamic properties of the catalytic cycle of HepI are explored. Previously, substrate-induced stabilization of HepI was observed and hypothesized to be assisted by interactions between the substrate and residues located on dynamic loops. Herein, positively charged amino acids were probed to identify binding partners of the negatively charged phosphates and carboxylates of Kdo

Indexed as

Escherichia coliGlycosyltransferasesMolecular Dynamics SimulationMutationProtein BindingProtein ConformationSequence AlignmentGlycosyltransferasesheptosyltransferase

Identifiers

PMID32011131
PMCPMC7582807

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.