Evidence map›Paper›PMID 32005831›Full record

ArticleNature communications2020

Elucidating target specificity of the taccalonolide covalent microtubule stabilizers employing a combinatorial chemical approach.

Lin Du, Samantha S Yee, Karthik Ramachandran, April L Risinger

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Pharmacokinetic and Biodistribution Studies of [ACS medicinal chemistry letters · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Taccalonolide Microtubule Stabilizers.Progress in the chemistry of organic natural products · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Lin Du *Department of Chemistry and Biochemistry, The University of Oklahoma, Norman, OK, USA. Lin.Du-1@ou.edu.ORCID http://orcid.org/0000-0001-8751-4482
Samantha S Yee *Department of Pharmacology, The University of Texas Health Science Center, San Antonio, TX, USA.ORCID http://orcid.org/0000-0001-7953-0183
Karthik RamachandranDepartment of Medicine, Division of Nephrology, The University of Texas Health Science Center, San Antonio, TX, USA.ORCID http://orcid.org/0000-0003-3673-3559
April L RisingerDepartment of Pharmacology, The University of Texas Health Science Center, San Antonio, TX, USA. risingera@uthscsa.edu.ORCID http://orcid.org/0000-0002-4363-3268
The University of Texas Health Science Center at San Antonio · USUniversity of Oklahoma · US

Funding

Optimization of a novel class of microtubule stabilizersR01CA219948 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI RISINGER, APRIL L · 2018 to 2022
$1.7M
NCI NIH HHS R01 CA219948
6 · The paper itself

Abstract

The taccalonolide microtubule stabilizers covalently bind β-tubulin and overcome clinically relevant taxane resistance mechanisms. Evaluations of the target specificity and detailed drug-target interactions of taccalonolides, however, have been limited in part by their irreversible target engagement. In this study, we report the synthesis of fluorogenic taccalonolide probes that maintain the native biological properties of the potent taccalonolide, AJ. These carefully optimized, cell-permeable probes outperform commercial taxane-based probes and enable direct visualization of taccalonolides in both live and fixed cells with dramatic microtubule colocalization. The specificity of taccalonolide binding to β-tubulin is demonstrated by immunoblotting, which allows for determination of the relative contribution of key tubulin residues and taccalonolide moieties for drug-target interactions by activity-based protein profiling utilizing site-directed mutagenesis and computational modeling. This combinatorial approach provides a generally applicable strategy for investigating the binding specificity and molecular interactions of covalent binding drugs in a cellular environment.

Indexed as

Cell Line, TumorHumansKineticsMicrotubulesModels, MolecularSteroidsTubulinSteroidsTubulin

Identifiers

PMID32005831
PMCPMC6994698
OpenAlexW3003829106

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.