Evidence map›Paper›PMID 32005156›Full record

ArticleBMC plant biology2020

Quantitative trait loci analysis of seed oil content and composition of wild and cultivated soybean.

Yanjie Yao, Qingbo You, Guozhan Duan, Jianjun Ren, Shanshan Chu, Junqing Zhao, Xia Li, Xinan Zhou, Yongqing Jiao

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 74 citations in OpenAlex.

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  10. Identification of candidate genes and genomic prediction of soybean fatty acid components in two soybean populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  13. New value chainFood science & nutrition · 2024
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  15. Identification of an important QTL for seed oil content in soybean.Molecular breeding : new strategies in plant improvement · 2023
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  18. Frontiers in plant science · 2022
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Yanjie YaoKey laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan, 430062, China.
Qingbo YouKey laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan, 430062, China.
Guozhan DuanSoybean Research Laboratory, Xuchang Research Institute of Agricultural Sciences, Xuchang, 461000, China.
Jianjun RenSoybean Research Laboratory, Xuchang Research Institute of Agricultural Sciences, Xuchang, 461000, China.
Shanshan ChuCollaborative Innovation Center of Henan Grain Crops /College of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Junqing ZhaoSoybean Research Laboratory, Xuchang Research Institute of Agricultural Sciences, Xuchang, 461000, China.
Xia LiState Key Laboratory of Agricultural Microbiology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, 430070, China. xli@mail.hzau.edu.cn.
Xinan ZhouKey laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan, 430062, China. zhouxinan@caas.cn.
Yongqing JiaoKey laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan, 430062, China. jiaoyongqing@henau.edu.cn.ORCID http://orcid.org/0000-0002-8586-6350
Sweet Potato Research Institute · CNChinese Academy of Agricultural Sciences · CNHuazhong Agricultural University · CNHenan Agricultural University · CNOil Crops Research Institute · CN

Funding

Chinese Academy of Agricultural Sciences Y2017JC14National Key Research and Development Program of China 2016YFD0100504National Natural Science Foundation of China 31522042 and 31371654National Transgenic Project 2016ZX08004003Natural Science Foundation of Hubei 2016CFA049
6 · The paper itself

Abstract

backgroundSoybean oil is a major source of edible oil, and the domestication of wild soybean has resulted in significant changes in oil content and composition. Extensive efforts have been made to identify genetic loci that are related to soybean oil traits. The objective of this study was to identify quantitative trait loci (QTLs) related to soybean seed oil and compare the fatty acid composition between wild and cultivated soybean.

resultsUsing the specific-locus amplified fragment sequencing (SLAF-seq) method, a total of 181 recombinant inbred lines (RILs) derived from a cross between wild soybean ZYD00463 (Glycine soja) and cultivated soybean WDD01514 (Glycine max) were genotyped. Finally, a high-density genetic linkage map comprising 11,398 single-nucleotide polymorphism (SNP) markers on 20 linkage groups (LGs) was constructed. Twenty-four stable QTLs for seed oil content and composition were identified by model-based composite interval mapping (CIM) across multiple environments. Among these QTLs, 23 overlapped with or were adjacent to previously reported QTLs. One QTL, qPA10_1 (5.94-9.98 Mb) on Chr. Ten is a novel locus for palmitic acid. In the intervals of stable QTLs, some interesting genes involved in lipid metabolism were detected.

conclusionsWe developed 181 RILs from a cross between wild soybean ZYD00463 and cultivated soybean WDD01514 and constructed a high-density genetic map using the SLAF-seq method. We identified 24 stable QTLs for seed oil content and compositions, which includes qPA10_1 on Chr. 10, a novel locus for palmitic acid. Some interesting genes in the QTL regions were also detected. Our study will provide useful information for scientists to learn about genetic variations in lipid metabolism between wild and cultivated soybean.

Indexed as

Crops, AgriculturalFatty AcidsGlycine maxQuantitative Trait LociSeedsSoybean OilFatty AcidsSoybean OilOil and fatty acidsQTLSLAF-seqSoybean (Glycine max)

Identifiers

PMID32005156
PMCPMC6995124
OpenAlexW3010677409

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.