Evidence map›Paper›PMID 32004340›Full record

ArticlePloS one2020

Growth rate assays reveal fitness consequences of β-lactamases.

Fabian Santiago, Evin Doscher, Jay Kim, Manel Camps, Juan Meza, Suzanne Sindi, Miriam Barlow

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Fabian SantiagoDepartment of Applied Mathematics, University of California Merced, Merced, CA, United States of America.ORCID 0000-0002-5369-4128
Evin DoscherDepartment of Molecular and Cellular Biology, University of California Merced, Merced, CA, United States of America.
Jay KimDepartment of Microbiology and Environmental Toxicology, University of California at Santa Cruz, Santa Cruz, CA, United States of America.ORCID 0000-0002-7879-0108
Manel CampsDepartment of Microbiology and Environmental Toxicology, University of California at Santa Cruz, Santa Cruz, CA, United States of America.ORCID 0000-0002-0467-4032
Juan MezaDepartment of Applied Mathematics, University of California Merced, Merced, CA, United States of America.ORCID 0000-0003-4543-0349
Suzanne SindiDepartment of Applied Mathematics, University of California Merced, Merced, CA, United States of America.ORCID 0000-0003-2742-4332
Miriam BarlowDepartment of Molecular and Cellular Biology, University of California Merced, Merced, CA, United States of America.ORCID 0000-0002-7349-190X
University of California, Merced · USUniversity of California, Santa Cruz · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NON-TECHNICAL SUMMARY: Antibiotic resistance is a global human health problem. We partnered with Dignity Health Mercy Medical Center to study antibiotic resistance in clinical isolates. We tested whether growth rates, a sensitive assay used to measure the fitness of bacterial samples, correlate with a clinical test to measure antibiotic resistance. We found a strong correlation between these two methods suggesting that growth rates could be reliably applied to evolutionary studies of clinically relevant problems. Moreover, the sensitivity of the growth rates assay enabled us to identify fitness effects of specific antibiotic resistance genes.

Indexed as

Anti-Bacterial Agentsbeta-LactamasesDrug Resistance, BacterialEscherichia coliHumansMicrobial Sensitivity TestsUrinary Tract InfectionsAnti-Bacterial Agentsbeta-Lactamases

Identifiers

PMID32004340
PMCPMC6993977
OpenAlexW3003527726

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.