Evidence map›Paper›PMID 31999691›Full record

ArticlePloS one2020

Duplication and subfunctionalisation of the general transcription factor IIIA (gtf3a) gene in teleost genomes, with ovarian specific transcription of gtf3ab.

Iratxe Rojo-Bartolomé, Jorge Estefano Santana de Souza, Oihane Diaz de Cerio, Ibon Cancio

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Inherited human TFIIIA deficiency disrupts T cell development.medRxiv : the preprint server for health sciences · 2026
    Article
  2. Article
  3. Article
  4. Single-Cell Atlas of the Chinese Tongue SoleFrontiers in cell and developmental biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Iratxe Rojo-BartoloméCBET Research Group, Centre for Experimental Marine Biology and Biotechnology (PiE-UPV/EHU) and Dept. of Zoology and Cell Biology (Fac. Science and Technology), University of the Basque Country (UPV/EHU), Bilbao, Basque Country, Spain.
Jorge Estefano Santana de SouzaBioinformatics Multidisciplinary Environment - BioME, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Oihane Diaz de CerioCBET Research Group, Centre for Experimental Marine Biology and Biotechnology (PiE-UPV/EHU) and Dept. of Zoology and Cell Biology (Fac. Science and Technology), University of the Basque Country (UPV/EHU), Bilbao, Basque Country, Spain.ORCID 0000-0002-5605-8434
Ibon CancioCBET Research Group, Centre for Experimental Marine Biology and Biotechnology (PiE-UPV/EHU) and Dept. of Zoology and Cell Biology (Fac. Science and Technology), University of the Basque Country (UPV/EHU), Bilbao, Basque Country, Spain.
University of the Basque Country · ESUniversidade Federal do Rio Grande do Norte · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fish oogenesis is characterised by a massive growth of oocytes each reproductive season. This growth requires the stockpiling of certain molecules, such as ribosomal RNAs to assist the rapid ribosomal assembly and protein synthesis required to allow developmental processes in the newly formed embryo. Massive 5S rRNA expression in oocytes, facilitated by transcription factor 3A (Gtf3a), serves as marker of intersex condition in fish exposed to xenoestrogens. Our present work on Gtf3a gene evolution has been analysed in silico in teleost genomes and functionally in the case of the zebrafish Danio rerio. Synteny-analysis of fish genomes has allowed the identification of two gtf3a paralog genes, probably emerged from the teleost specific genome duplication event. Functional analyses demonstrated that gtf3ab has evolved as a gene specially transcribed in oocytes as observed in Danio rerio, and also in Oreochromis niloticus. Instead, gtf3aa was observed to be ubiquitously expressed. In addition, in zebrafish embryos gtf3aa transcription began with the activation of the zygotic genome (~8 hpf), while gtf3ab transcription began only at the onset of oogenesis. Under exposure to 100 ng/L 17β-estradiol, fully feminised 61 dpf zebrafish showed transcription of ovarian gtf3ab, while masculinised (100 ng/L 17α-methyltestosterone treated) zebrafish only transcribed gtf3aa. Sex related transcription of gtf3ab coincided with that of cyp19a1a being opposite to that of amh and dmrt1. Such sex dimorphic pattern of gtf3ab transcription was not observed earlier in larvae that had not yet shown any signs of gonad formation after 26 days of oestradiol exposure. Thus, gtf3ab transcription is a consequence of oocyte differentiation and not a direct result of estrogen exposure, and could constitute a useful marker of gonad feminisation and intersex condition.

Indexed as

AnimalsCichlidsDisorders of Sex DevelopmentEvolution, MolecularFemaleFish ProteinsGene DuplicationMaleOogenesisOvaryPhylogenySex CharacteristicsSex DifferentiationSyntenyTranscription Factor TFIIIAZebrafishFish ProteinsTranscription Factor TFIIIAZebrafish Proteins

Identifiers

PMID31999691
PMCPMC6991959
OpenAlexW3003993899

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.