Evidence map›Paper›PMID 31997856›Full record

ArticleStatistics and computing2018

Likelihood-free inference via classification.

Michael U Gutmann, Ritabrata Dutta, Samuel Kaski, Jukka Corander

Open access · hybridAbstract read
In one paragraph

Article in Statistics and computing, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
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  7. The frontier of simulation-based inference.Proceedings of the National Academy of Sciences of the United States of America · 2020
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  8. Mining gold from implicit models to improve likelihood-free inference.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Article
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  11. Bayesian inference of spreading processes on networks.Proceedings. Mathematical, physical, and engineering sciences · 2018
    Article
  12. Likelihood-free inference via classification.Statistics and computing · 2018
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Michael U Gutmann1School of Informatics, University of Edinburgh, Edinburgh, UK.
Ritabrata Dutta2InterDisciplinary Institute of Data Science, Universitá della Svizzera italiana, Lugano, Switzerland.
Samuel Kaski3Helsinki Institute for Information Technology, Department of Computer Science, Aalto University, Espoo, Finland.
Jukka Corander4Department of Biostatistics, University of Oslo, Oslo, Norway.
Helsinki Institute for Information Technology · FIUniversity of Edinburgh · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasingly complex generative models are being used across disciplines as they allow for realistic characterization of data, but a common difficulty with them is the prohibitively large computational cost to evaluate the likelihood function and thus to perform likelihood-based statistical inference. A likelihood-free inference framework has emerged where the parameters are identified by finding values that yield simulated data resembling the observed data. While widely applicable, a major difficulty in this framework is how to measure the discrepancy between the simulated and observed data. Transforming the original problem into a problem of classifying the data into simulated versus observed, we find that classification accuracy can be used to assess the discrepancy. The complete arsenal of classification methods becomes thereby available for inference of intractable generative models. We validate our approach using theory and simulations for both point estimation and Bayesian inference, and demonstrate its use on real data by inferring an individual-based epidemiological model for bacterial infections in child care centers.

Indexed as

Approximate Bayesian computationGenerative modelsIntractable likelihoodLatent variable modelsSimulator-based models

Identifiers

PMID31997856
PMCPMC6956883
OpenAlexW1502641836

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.