Evidence map›Paper›PMID 31997046›Full record

ArticleFamilial cancer2020

Detection of DNA mismatch repair deficient crypts in random colonoscopic biopsies identifies Lynch syndrome patients.

Randall E Brand, Beth Dudley, Eve Karloski, Rohit Das, Kimberly Fuhrer, Rish K Pai, Reetesh K Pai

Abstract read
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In one paragraph

Article in Familial cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Therapeutic targeting of mismatch repair-deficient cancers.Nature reviews. Clinical oncology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Randall E BrandDepartment of Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Beth DudleyDepartment of Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Eve KarloskiDepartment of Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Rohit DasDepartment of Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Kimberly FuhrerDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Rish K PaiDepartment of Laboratory Medicine and Pathology, Mayo Clinic Arizona, Scottsdale, AZ, USA.
Reetesh K PaiDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, USA. pair@upmc.edu.ORCID 0000-0003-4770-2926
University of Pittsburgh Medical Center · USMayo Clinic in Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hallmark of Lynch syndrome (LS)-associated neoplasia is DNA mismatch repair protein (MMR) deficiency. Recent studies have demonstrated that histologically normal colonic crypts in patients with LS can exhibit deficient MMR expression. The aim of this study was to determine the feasibility of detecting MMR deficient crypts in random colonoscopic biopsies of normal mucosa in patients with and without LS. Forty-nine patients, including 33 with LS, 12 without LS, and 4 with germline MMR gene variants of uncertain significance (VUS), were prospectively and blindly evaluated by immunohistochemistry for MMR deficient crypts within random normal-appearing mucosal biopsies obtained during surveillance colonoscopy. MMR deficient crypts were identified in 70% (23/33) of patients with LS and in no patients without LS (0/12) (p < 0.001). MMR deficient crypts were identified with nearly equal frequency in both LS patients with and without a cancer history and were associated with germline variants in all four MMR genes and EPCAM. MMR deficient crypts were also identified in LS patients with a history of non-colorectal cancer types, including patients with endometrial cancer, skin sebaceous neoplasms, and renal cancer. Two of the four patients with germline MMR gene VUS had MMR deficient crypts. In conclusion, MMR deficient crypts are a specific biomarker of LS and can be identified in random normal mucosal biopsies in LS patients. Evaluation for MMR deficient crypts in colonoscopic biopsies of normal mucosa can help identify LS patients.

Indexed as

ColonoscopyDNA Mismatch RepairGerm-Line MutationAdultAgedBiopsyColorectal Neoplasms, Hereditary NonpolyposisDNA-Binding ProteinsEpithelial Cell Adhesion MoleculeFeasibility StudiesFemaleHumansIntestinal MucosaMaleMiddle AgedMismatch Repair Endonuclease PMS2DNA-Binding ProteinsEPCAM protein, humanEpithelial Cell Adhesion MoleculeG-T mismatch-binding proteinMismatch Repair Endonuclease PMS2MLH1 protein, humanMSH2 protein, humanMutL Protein Homolog 1MutS Homolog 2 ProteinPMS2 protein, humanColonoscopyColorectal carcinomaDNA mismatch repair proteinImmunohistochemistryLynch syndromeMSI

Identifiers

PMID31997046
OpenAlexW3004330855

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.