Evidence map›Paper›PMID 31996893›Full record

ArticleNucleic acids research2020

WDR5 is a conserved regulator of protein synthesis gene expression.

Audra F Bryan, Jing Wang, Gregory C Howard, Alissa D Guarnaccia, Chase M Woodley, Erin R Aho, Eric J Rellinger, Brittany K Matlock, David K Flaherty, Shelly L Lorey and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 86 citations in OpenAlex.

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  11. Molecular principles underlying aggressive cancers.Signal transduction and targeted therapy · 2025
    Review
  12. Article
  13. Review
  14. Article
  15. Expanded profiling of WD repeat domain 5 inhibitors reveals actionable strategies for the treatment of hematologic malignancies.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Audra F BryanDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Jing WangDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37240, USA.
Gregory C HowardDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Alissa D GuarnacciaDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Chase M WoodleyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Erin R AhoDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Eric J RellingerDepartment of Pediatric General and Thoracic Surgery, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Brittany K MatlockVanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN 37240, USA.
David K FlahertyVanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN 37240, USA.
Shelly L LoreyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Dai H ChungDepartment of Pediatric General and Thoracic Surgery, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Stephen W FesikDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Qi LiuDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37240, USA.
April M WeissmillerDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
William P TanseyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Vanderbilt University · USVanderbilt University Medical Center · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt-Ingram Cancer Center SPORE in Gastrointestinal CancerP50CA236733 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STEPHEN W. FESIK · 2019 to 2026
$19.6M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
VANTAGE:Consolidation to create the Vanderbilt Technologies for Advanced GenomicsG20RR030956 · NCRR · VANDERBILT UNIVERSITY · PI PIETENPOL, JENNIFER A · 2010 to 2010
$8.7M
Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Facilitated recruitment of MYC to chromatin by interaction with WDR5R01CA200709 · NCI · VANDERBILT UNIVERSITY · PI TANSEY, WILLIAM PATRICK · 2016 to 2025
$3.9M
Myc, WDR5, and CancerR50CA211305 · NCI · VANDERBILT UNIVERSITY · PI THOMAS, LANCE R · 2017 to 2019
$375k
Investigating MYC and WDR5 chromatin interactions in cancerF31CA225065 · NCI · VANDERBILT UNIVERSITY · PI GUARNACCIA, ALISSA DUPUY · 2018 to 2020
$88k
WDR5 as a Critical Co-Factor for MYCF31CA210429 · NCI · VANDERBILT UNIVERSITY · PI BRYAN, AUDRA F. · 2016 to 2018
$86k
CCR NIH HHS HHSN261200800001CNCI NIH HHS F31 CA210429NCI NIH HHS F31 CA225065NCI NIH HHS HHSN261200800001ENCI NIH HHS P30 CA068485NCI NIH HHS P50 CA236733NCI NIH HHS R01 CA200709NCI NIH HHS R50 CA211305NCI NIH HHS T32 CA009582NCI NIH HHS T32 CA119925NCRR NIH HHS G20 RR030956NEI NIH HHS P30 EY008126NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

WDR5 is a highly-conserved nuclear protein that performs multiple scaffolding functions in the context of chromatin. WDR5 is also a promising target for pharmacological inhibition in cancer, with small molecule inhibitors of an arginine-binding pocket of WDR5 (the 'WIN' site) showing efficacy against a range of cancer cell lines in vitro. Efforts to understand WDR5, or establish the mechanism of action of WIN site inhibitors, however, are stymied by its many functions in the nucleus, and a lack of knowledge of the conserved gene networks-if any-that are under its control. Here, we have performed comparative genomic analyses to identify the conserved sites of WDR5 binding to chromatin, and the conserved genes regulated by WDR5, across a diverse panel of cancer cell lines. We show that a specific cohort of protein synthesis genes (PSGs) are invariantly bound by WDR5, demonstrate that the WIN site anchors WDR5 to chromatin at these sites, and establish that PSGs are bona fide, acute, and persistent targets of WIN site blockade. Together, these data reveal that WDR5 plays a predominant transcriptional role in biomass accumulation and provide further evidence that WIN site inhibitors act to repress gene networks linked to protein synthesis homeostasis.

Indexed as

Gene Expression RegulationBase SequenceBinding SitesCell LineChromatinConserved SequenceFemaleHumansIntracellular Signaling Peptides and ProteinsMaleProtein BindingProtein BiosynthesisTranscription, GeneticTumor Suppressor Protein p53ChromatinIntracellular Signaling Peptides and ProteinsTumor Suppressor Protein p53WDR5 protein, human

Identifiers

PMID31996893
PMCPMC7102967
OpenAlexW3004166470

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.