Evidence map›Paper›PMID 31996269›Full record

Observational studyOrphanet journal of rare diseases2020

Correlation between GLA variants and alpha-Galactosidase A profile in dried blood spot: an observational study in Brazilian patients.

Patrícia Varela, Gianna Mastroianni Kirsztajn, Fabiana L Motta, Renan P Martin, Lauro T Turaça, Henrique L F Ferrer, Caio P Gomes, Priscila Nicolicht, Maryana Mara Marins, Juliana G Pessoa and 4 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Orphanet journal of rare diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Patrícia VarelaCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Gianna Mastroianni KirsztajnDivision of Nephrology - Department of Medicine, Federal University of São Paulo, São Paulo, SP, Brazil.
Fabiana L MottaCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Renan P MartinCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Lauro T TuraçaCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Henrique L F FerrerCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Caio P GomesCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Priscila NicolichtCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Maryana Mara MarinsCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Juliana G PessoaCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil.
Marion C BragaDepartment of Psychobiology, Federal University of São Paulo, São Paulo, SP, Brazil.
Vânia D'AlmeidaDepartment of Psychobiology, Federal University of São Paulo, São Paulo, SP, Brazil.
Ana Maria MartinsReference Center in Inborn Errors of Metabolism, Pediatrics Department, Federal University of São Paulo, São Paulo, SP, Brazil.
João B PesqueroCenter for Research and Molecular Diagnostic of Genetic Diseases - Department of Biophysics, Federal University of São Paulo, Rua Pedro de Toledo, 669 - 9o andar, São Paulo, 04039-032, Brazil. jbpesquero@gmail.com.
Universidade Federal de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFabry disease is a rare X-linked inherited disorder caused by deficiency of α-Galactosidase A. Hundreds of mutations and non-coding haplotypes in the GLA gene have been described; however, many are variants of unknown significance, prompting doubts about the diagnosis and treatment. The α-Galactosidase A enzymatic activity in dried blood spot (DBS) samples are widely used for screening purposes; however, even when values below the normal are found, new tests are required to confirm the diagnosis. Here we describe an analysis of GLA variants and their correlation with DBS α-Galactosidase A enzymatic activity in a large Brazilian population with Fabry disease symptoms.

resultsWe analyzed GLA variants by DNA sequencing of 803 male patients with suspected Fabry disease or belonging to high-risk populations; in 179 individuals, 58 different exonic variants were detected. From these, 50 are variants described as pathogenic and eight described as variants of unknown significance. The other individuals presented complex non-coding haplotypes or had no variants. Interestingly, the enzymatic activity in DBS was different among pathogenic variants and the other genotypes, including variants of unknown significance; the first presented mean of 12% of residual activity, while the others presented levels above 70% of the activity found in healthy controls.

conclusionThe activity of α-Galactosidase A in DBS was markedly reduced in males with known pathogenic variants when compared with subjects presenting variants of unknown significance, non-coding haplotypes, or without variants, indicating a possible non-pathogenic potential of these latter genotypes. These findings bring a better understanding about the biochemical results of α-Galactosidase A in DBS samples, as well as the possible non-pathogenic potential of non-coding haplotypes and variants of unknown significance in GLA gene. These results certainly will help clinicians to decide about the treatment of patients carrying variants in the gene causing this rare but life-threatening disease.

Indexed as

alpha-GalactosidaseDried Blood Spot TestingFabry DiseaseGenotypeHaplotypesHumansMaleMutationalpha-GalactosidaseDBS enzymatic activityFabry diseaseGLA geneMolecular diagnosisNon-coding haplotypesα-Galactosidase A activity

Identifiers

PMID31996269
PMCPMC6990533
OpenAlexW3005085262

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.