Evidence map›Paper›PMID 31995966›Full record

ArticleAsian spine journal2020

Proteomic Signature of Nucleus Pulposus in Fetal Intervertebral Disc.

Shanmuganathan Rajasekaran, Dilip Chand Raja Soundararajan, Chitraa Tangavel, Sri Vijay Anand K S, Sharon Miracle Nayagam, Monica Steffi Matchado, Raveendran Muthurajan, Ajoy Prasad Shetty, Rishi Mugesh Kanna, K Dharmalingam

Open access · diamondAbstract read
In one paragraph

Article in Asian spine journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shanmuganathan RajasekaranDepartment of Spine Surgery, Ganga Hospital, Coimbatore, India.
Dilip Chand Raja SoundararajanDepartment of Spine Surgery, Ganga Hospital, Coimbatore, India.
Chitraa TangavelGanga Research Centre, Coimbatore, India.
Sri Vijay Anand K SDepartment of Spine Surgery, Ganga Hospital, Coimbatore, India.
Sharon Miracle NayagamGanga Research Centre, Coimbatore, India.
Monica Steffi MatchadoGanga Research Centre, Coimbatore, India.
Raveendran MuthurajanDepartment of Plant Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India.
Ajoy Prasad ShettyDepartment of Spine Surgery, Ganga Hospital, Coimbatore, India.
Rishi Mugesh KannaDepartment of Spine Surgery, Ganga Hospital, Coimbatore, India.
K DharmalingamAravind Medical Research Foundation, Madurai, India.
Ganga Hospital · INTamil Nadu Agricultural University · IN

Funding

Ganga Orthopaedic Research and Education Foundation GOREF-01-2019
6 · The paper itself

Abstract

STUDY

designProfiling proteins expressed in the nucleus pulposus of fetal intervertebral disc (IVD). PURPOSE: To evaluate the molecular complexity of fetal IVDs not exposed to mechanical, traumatic, inflammatory, or infective insults to generate improved knowledge on disc homeostasis. OVERVIEW OF LITERATURE: Low back pain is the most common musculoskeletal disorder, causing a significant reduction in the quality of life, and degenerative disc disorders mainly contribute to the increasing socioeconomic burden. Despite extensive research, the causative pathomechanisms behind degenerative disc disorders are poorly understood. Precise molecular studies on the intricate biological processes involved in maintaining normal disc homeostasis are needed.

methodsIVDs of nine fetal specimens obtained from medical abortions were used to dissect out the annulus fibrosus and nucleus pulposus under sterile operating conditions. Dissected tissues were transferred to sterile Cryovials and snap frozen in liquid nitrogen before transporting to the research laboratory for protein extraction and further liquid chromatography tandem mass spectrometry (LC-MS/ MS) analysis. Collected data were further analyzed using Gene Functional Classification Tool in DAVID and STRING databases.

resultsA total of 1,316 proteins were identified through LC-MS/MS analysis of nine fetal IVD tissues. Approximately 247 proteins present in at least four fetal discs were subjected to further bioinformatic analysis. The following 10 clusters of proteins were identified: collagens, ribosomal proteins, small leucine-rich proteins, matrilin and thrombospondin, annexins, protein disulfide isomerase family proteins and peroxiredoxins, tubulins, histones, hemoglobin, and prolyl 4-hydroxylase family proteins.

conclusionsThis study provides fundamental information on the proteome networks involved in the growth and development of healthy fetal discs in humans. Systematic cataloging of proteins involved in various structural and regulatory processes has been performed. Proteins expressed most abundantly (collagen type XIV alpha 1 chain, biglycan, matrilin 1, and thrombospondin 1) in their respective clusters also elucidate the possibility of utilizing these proteins for potential regenerative therapies.

Indexed as

Disc degenerationFetal intervertebral disc proteomeIntervertebral disc degenerationLow back pain

Identifiers

PMID31995966
PMCPMC7435318
OpenAlexW3003583234

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.