Evidence map›Paper›PMID 31993089›Full record

ArticleEvolutionary applications2020

The fine-scale genetic structure and selection signals of Chinese indigenous pigs.

Min Huang, Bin Yang, Hao Chen, Hui Zhang, Zhongping Wu, Huashui Ai, Jun Ren, Lusheng Huang

Open access · goldAbstract read
In one paragraph

Article in Evolutionary applications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 65 citations in OpenAlex.

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  17. Genetic and Phenotypic Characteristics of Belted Pig Breeds: A Review.Animals : an open access journal from MDPI · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Min HuangState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Bin YangState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Hao ChenState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Hui ZhangState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Zhongping WuState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Huashui AiState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.ORCID https://orcid.org/0000-0002-2859-8855
Jun RenState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.ORCID https://orcid.org/0000-0001-6664-3998
Lusheng HuangState Key Laboratory of Pig Genetic Improvement and Production Technology Jiangxi Agricultural University Nanchang China.
Jiangxi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide SNP profiling has yielded insights into the genetic structure of China indigenous pigs, but has focused on a limited number of populations. Here, we present an analysis of population structure and signals of positive selection in 42 Chinese pig populations that represent the most extensive pig phenotypic diversity in China, using genotype data of 1.1 million SNPs on customized Beadchips. This unravels the fine-scale genetic diversity, phylogenic relationships, and population structure of these populations, which shows remarkably concordance between genetic clusters and geography with few exceptions. We also reveal the genetic contribution to North Chinese pigs from European modern pigs. Furthermore, we identify possible targets of selection in the Tibetan pig, including the well-characterized hypoxia gene (

Indexed as

Chinese pigcoat colorgenetic diversityhigh‐altitude adaptationphylogenetic relationshippopulation structure

Identifiers

PMID31993089
PMCPMC6976964
OpenAlexW2982065761

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.