Evidence map›Paper›PMID 31992807›Full record

ArticleScientific reports2020

MBSP1: a biosurfactant protein derived from a metagenomic library with activity in oil degradation.

Sinara Carla da Silva Araújo, Rita C B Silva-Portela, Daniel Chaves de Lima, Marbella Maria Bernardes da Fonsêca, Wydemberg J Araújo, Uaska Bezerra da Silva, Amanda P Napp, Evandro Pereira, Marilene H Vainstein, Lucymara Fassarella Agnez-Lima

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Biotechnological potential of Lacticaseibacillus paracasei Shirota for bioemulsifier, bacteriocin and lipase production.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Article
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  12. Evaluation of biosurfactant production potential of Lysinibacillus fusiformis MK559526 isolated from automobile-mechanic-workshop soil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  13. Review
  14. Article
  15. Frontiers in bioengineering and biotechnology · 2020
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sinara Carla da Silva AraújoDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Rita C B Silva-PortelaDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Daniel Chaves de LimaDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Marbella Maria Bernardes da FonsêcaDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Wydemberg J AraújoDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Uaska Bezerra da SilvaDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.
Amanda P NappCenter of Biotechnology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Evandro PereiraCenter of Biotechnology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Marilene H VainsteinCenter of Biotechnology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.
Lucymara Fassarella Agnez-LimaDepartment of Cellular Biology and Genetics, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil. lfagnez@ufrnet.br.ORCID http://orcid.org/0000-0003-0642-3162
Universidade Federal do Rio Grande do Norte · BRUniversidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms represent the most abundant biomass on the planet; however, because of several cultivation technique limitations, most of this genetic patrimony has been inaccessible. Due to the advent of metagenomic methodologies, such limitations have been overcome. Prevailing over these limitations enabled the genetic pool of non-cultivable microorganisms to be exploited for improvements in the development of biotechnological products. By utilising a metagenomic approach, we identified a new gene related to biosurfactant production and hydrocarbon degradation. Environmental DNA was extracted from soil samples collected on the banks of the Jundiaí River (Natal, Brazil), and a metagenomic library was constructed. Functional screening identified the clone 3C6, which was positive for the biosurfactant protein and revealed an open reading frame (ORF) with high similarity to sequences encoding a hypothetical protein from species of the family Halobacteriaceae. This protein was purified and exhibited biosurfactant activity. Due to these properties, this protein was named metagenomic biosurfactant protein 1 (MBSP1). In addition, E. coli Rosetta

Indexed as

Lipid MetabolismBacterial ProteinsHalobacteriaceaeHydrocarbonsOilsOpen Reading FramesPhylogenyProtein ConformationStructure-Activity RelationshipSurface-Active AgentsBacterial ProteinsHydrocarbonsOilsSurface-Active Agents

Identifiers

PMID31992807
PMCPMC6987170
OpenAlexW3003200959

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.