Evidence map›Paper›PMID 31991737›Full record

ArticleViruses2020

Dynamic Shifts in the HIV Proviral Landscape During Long Term Combination Antiretroviral Therapy: Implications for Persistence and Control of HIV Infections.

Elizabeth M Anderson, Francesco R Simonetti, Robert J Gorelick, Shawn Hill, Monica A Gouzoulis, Jennifer Bell, Catherine Rehm, Liliana Pérez, Eli Boritz, Xiaolin Wu and 6 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 47 citations in OpenAlex.

  1. The immunophenotype and proviral landscape of HIV-infected CD4 T cells during antiretroviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  7. HIV-1 control in vivo is related to the number but not the fraction of infected cells with viral unspliced RNA.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
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  10. HIV Reservoirs and Treatment Strategies toward Curing HIV Infection.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Elizabeth M AndersonHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Francesco R SimonettiHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Robert J GorelickFrederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Shawn HillHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Monica A GouzoulisHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Jennifer BellFrederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Catherine RehmLaboratory of Immunoregulation, NIAID, NIH, Bethesda, MD 20814, USA.
Liliana PérezVirus Persistence and Dynamics Section, VRC, NIAID, NIH, Bethesda, MD 20814, USA.
Eli BoritzVirus Persistence and Dynamics Section, VRC, NIAID, NIH, Bethesda, MD 20814, USA.
Xiaolin WuCancer Research Technology Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Daria WellsCancer Research Technology Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Stephen H HughesHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Venigalla RaoDepartment of Biology, The Catholic University of America, Washington, DC 20064, USA.
John M CoffinDepartment of Biology, Tufts University, Boston, MA 02155, USA.
Mary F KearneyHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Frank MaldarelliHIV Dynamics and Replication Program, NCI, NIH, Frederick, MD 21702, USA.
Frederick National Laboratory for Cancer Research · USLeidos (United States) · USNational Institutes of Health · USUniversity of America · USNational Institute of Allergy and Infectious Diseases · USTufts University · US

Funding

HIV Persistence During Suppressive Antiretroviral TherapyZIABC011466 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MALDARELLI, FRANK · 2012 to 2025
$16.0M
IntegraseZIABC011426 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HUGHES, STEPHEN H · 2012 to 2022
$14.0M
Dynamics and Genetics of HIV Proviruses Before and During Antiretroviral TherapyZIABC011681 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KEARNEY, MARY · 2016 to 2025
$9.3M
Retrovirus Evolution and CancerR35CA200421 · NCI · TUFTS UNIVERSITY BOSTON · PI COFFIN, JOHN M · 2016 to 2022
$6.5M
NCI NIH HHS HHSN261200800001ENCI NIH HHS R35 CA200421
6 · The paper itself

Abstract

Combination antiretroviral therapy (cART) controls but does not eradicate HIV infection; HIV persistence is the principal obstacle to curing infections. The proportion of defective proviruses increases during cART, but the dynamics of this process are not well understood, and a quantitative analysis of how the proviral landscape is reshaped after cART is initiated is critical to understanding how HIV persists. Here, we studied longitudinal samples from HIV infected individuals undergoing long term cART using multiplexed Droplet Digital PCR (ddPCR) approaches to quantify the proportion of deleted proviruses in lymphocytes. In most individuals undergoing cART, HIV proviruses that contain

Indexed as

Anti-HIV AgentsAntiretroviral Therapy, Highly ActiveCD4-Positive T-LymphocytesCell Cycle ProteinsDefective VirusesDNA, ViralGenes, gagHIV-1HIV InfectionsHIV Long Terminal RepeatHumansImmunologic MemoryLeukocytes, MononuclearMultiplex Polymerase Chain ReactionProvirusesTime FactorsAnti-HIV AgentsCell Cycle ProteinsDNA, ViralHORMAD2 protein, humanddPCRHIV clonal expansionHIV persistenceproviruses

Identifiers

PMID31991737
PMCPMC7077288
OpenAlexW3002390624

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.