Evidence map›Paper›PMID 31991584›Full record

ArticleInternational journal of molecular sciences2020

Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum (

Salah E Abdel-Ghany, Fahad Ullah, Asa Ben-Hur, Anireddy S N Reddy

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 148 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identifying genetic loci associated with drought tolerance in foxtail millet (Setaria italica).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Transcriptomic analysis ofFrontiers in plant science · 2025
    Article
  14. Functional genomic investigation ofFrontiers in plant science · 2025
    Article
  15. Deciphering drought-response in wheat (Frontiers in plant science · 2025
    Article
  16. Article
  17. Review
  18. Sorghum as a monocot model for drought research.Frontiers in plant science · 2025
    Review
  19. Transcriptomic Profile of Tef (Plants (Basel, Switzerland) · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Salah E Abdel-GhanyDepartment of Biology and Cell and Molecular Biology Program, Colorado State University, Fort Collins, CO 80523, USA.
Fahad UllahComputer Science Department, Colorado State University, Fort Collins, CO 80523, USA.
Asa Ben-HurComputer Science Department, Colorado State University, Fort Collins, CO 80523, USA.
Anireddy S N ReddyDepartment of Biology and Cell and Molecular Biology Program, Colorado State University, Fort Collins, CO 80523, USA.
Colorado State University · US

Funding

U.S. Department of Energy DE-SC0010733
6 · The paper itself

Abstract

Drought is a major limiting factor of crop yields. In response to drought, plants reprogram their gene expression, which ultimately regulates a multitude of biochemical and physiological processes. The timing of this reprogramming and the nature of the drought-regulated genes in different genotypes are thought to confer differential tolerance to drought stress. Sorghum is a highly drought-tolerant crop and has been increasingly used as a model cereal to identify genes that confer tolerance. Also, there is considerable natural variation in resistance to drought in different sorghum genotypes. Here, we evaluated drought resistance in four genotypes to polyethylene glycol (PEG)-induced drought stress at the seedling stage and performed transcriptome analysis in seedlings of sorghum genotypes that are either drought-resistant or drought-sensitive to identify drought-regulated changes in gene expression that are unique to drought-resistant genotypes of sorghum. Our analysis revealed that about 180 genes are differentially regulated in response to drought stress only in drought-resistant genotypes and most of these (over 70%) are up-regulated in response to drought. Among these, about 70 genes are novel with no known function and the remaining are transcription factors, signaling and stress-related proteins implicated in drought tolerance in other crops. This study revealed a set of drought-regulated genes, including many genes encoding uncharacterized proteins that are associated with drought tolerance at the seedling stage.

Indexed as

Gene Expression ProfilingGenotypeDehydrationGene Expression Regulation, PlantPolyethylene GlycolsSorghumTranscription, GeneticTranscriptomePolyethylene Glycolsdrought resistancegene expressionpolyethylene glycol (PEG), droughtsorghumtranscriptome

Identifiers

PMID31991584
PMCPMC7037816
OpenAlexW3001572338

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.