Evidence map›Paper›PMID 31991032›Full record

ArticleAmerican journal of reproductive immunology (New York, N.Y. : 1989)2020

Optimization of processing female genital tissue samples for lymphocyte analysis by flow cytometry.

Kevin A Stoner, May A Beamer, Hilary A Avolia, Leslie A Meyn, Sharon L Hillier, Sharon L Achilles

Open access · greenAbstract read
In one paragraph

Article in American journal of reproductive immunology (New York, N.Y. : 1989), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kevin A StonerMagee-Womens Research and Foundation, Pittsburgh, PA, USA.ORCID 0000-0002-1298-7602
May A BeamerMagee-Womens Research and Foundation, Pittsburgh, PA, USA.
Hilary A AvoliaMagee-Womens Research and Foundation, Pittsburgh, PA, USA.
Leslie A MeynDepartment of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Sharon L HillierMagee-Womens Research and Foundation, Pittsburgh, PA, USA.
Sharon L AchillesMagee-Womens Research and Foundation, Pittsburgh, PA, USA.ORCID 0000-0002-7478-8262
Magee-Womens Research Institute · USUniversity of Pittsburgh · US

Funding

Quantification of Immune Cells in Women Using ContraceptionR01AI102835 · NIAID · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI ACHILLES, SHARON LYNELLE · 2012 to 2016
$2.7M
NIAID NIH HHS R01 AI102835
6 · The paper itself

Abstract

problemA variety of methods have been used to process cervical cytobrush and genital tissue for flow cytometric evaluation of immune cell populations. We sought to optimize genital tract specimen processing and to determine if blood could be used as a model for assessment of tissue processing methods. METHOD OF STUDY: Cervical cytobrushes, PBMCs, and genital tissue samples (cervical and endometrial biopsies) were subjected to varying processing conditions to characterize the effects on cell yields, lymphocyte viability, and surface receptors. We exposed PBMC and tissue specimens to varied collagenase types, concentrations, and exposure durations and cytobrushes to immediate vs delayed processing with/without vortexing.

resultsPBMCs and tissues exposed to varying enzymatic digestion conditions demonstrated stability of some cell surface receptors, including CD3

conclusionAlthough tissue digestion with collagenase D was sufficient to recover and analyze cells from endometrial biopsy specimens, cervical biopsy specimens required a limited exposure to collagenase B at 1 mg/mL to optimize cell yield and viability for cytometric analysis. PBMCs can be used as a model to assess the impact of tissue processing on co-receptor expression and to optimize methods prior to study implementation.

Indexed as

Antigens, CDCell SeparationFemaleFlow CytometryGenitalia, FemaleHumansLeukocytes, MononuclearLymphocytesSpecimen HandlingAntigens, CDbiopsycollagenasescytobrushflow cytometrylymphocytestissue

Identifiers

PMID31991032
PMCPMC7176536
OpenAlexW3003271851

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.