Evidence map›Paper›PMID 31990937›Full record

ArticlePloS one2020

Genome wide association study of incomplete hippocampal inversion in adolescents.

Claire Cury, Marzia Antonella Scelsi, Roberto Toro, Vincent Frouin, Eric Artiges, Antoine Grigis, Andreas Heinz, Hervé Lemaître, Jean-Luc Martinot, Jean-Baptiste Poline and 6 more

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Claire CuryCentre for Medical Image Computing, Department of Medical Physics and Biomedical Engineering, University College London, London, England, United Kingdom.ORCID 0000-0002-9903-7940
Marzia Antonella ScelsiCentre for Medical Image Computing, Department of Medical Physics and Biomedical Engineering, University College London, London, England, United Kingdom.
Roberto ToroCentre National de la Recherche Scientifique, Genes, Synapses and Cognition, URA, Institut Pasteur, Paris, France.
Vincent FrouinNeuroSpin, CEA, Université Paris-Saclay, Gif-sur-Yvette, France.
Eric ArtigesInserm U 1000 "Neuroimaging & Psychiatry", University Paris Sud, University Paris Descartes-Sorbonne Paris Cité, and Psychiatry Department 91G16, Orsay Hospital, France.
Antoine GrigisNeuroSpin, CEA, Université Paris-Saclay, Gif-sur-Yvette, France.
Andreas HeinzCharité -Universitätsmedizin Berlin, Department of Psychiatry and Psychotherapy, Campus Charité Mitte, Charitéplatz 1, Berlin, Germany.
Hervé LemaîtreInserm U 1000 "Neuroimaging & Psychiatry", Faculté de médecine, Université Paris-Sud, Le Kremlin-Bicêtre, and Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
Jean-Luc MartinotInserm U 1000 "Neuroimaging & Psychiatry", University Paris Sud, University Paris Descartes-Sorbonne Paris Cité, and Maison de Solenn, Paris, France.
Jean-Baptiste PolineMcGill University, Faculty of Medicine, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Center, Ludmer Centre for Neuroinformatics and Mental Health, Canada.
Michael N SmolkaDepartment of Psychiatry and Neuroimaging Center, Technische Universität Dresden, Dresden, Germany.
Henrik WalterCharité -Universitätsmedizin Berlin, Department of Psychiatry and Psychotherapy, Campus Charité Mitte, Charitéplatz 1, Berlin, Germany.
Gunter SchumannMedical Research Council-Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, England, United Kingdom.
Andre AltmannCentre for Medical Image Computing, Department of Medical Physics and Biomedical Engineering, University College London, London, England, United Kingdom.ORCID 0000-0002-9265-2393
Olivier ColliotInstitut du Cerveau et de la Moelle épinière, ICM, Paris, France.
IMAGEN Consortium

Funding

Creating a Pediatric Imaging-Genomics Data ResourceRC2DA029475 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, LINDA, DALE, ANDERS M · 2009 to 2011
$9.1M
Medical Research Council MR/L016311/1NIDA NIH HHS RC2 DA029475
6 · The paper itself

Abstract

Incomplete hippocampal inversion (IHI), also called hippocampal malrotation, is an atypical presentation of the hippocampus present in about 20% of healthy individuals. Here we conducted the first genome-wide association study (GWAS) in IHI to elucidate the genetic underpinnings that may contribute to the incomplete inversion during brain development. A total of 1381 subjects contributed to the discovery cohort obtained from the IMAGEN database. The incidence rate of IHI was 26.1%. Loci with P<1e-5 were followed up in a validation cohort comprising 161 subjects from the PING study. Summary statistics from the discovery cohort were used to compute IHI heritability as well as genetic correlations with other traits. A locus on 18q11.2 (rs9952569; OR = 1.999; Z = 5.502; P = 3.755e-8) showed a significant association with the presence of IHI. A functional annotation of the locus implicated genes AQP4 and KCTD1. However, neither this locus nor the other 16 suggestive loci reached a significant p-value in the validation cohort. The h2 estimate was 0.54 (sd: 0.30) and was significant (Z = 1.8; P = 0.036). The top three genetic correlations of IHI were with traits representing either intelligence or education attainment and reached nominal P< = 0.013.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAdolescentAquaporin 4Brain DiseasesCo-Repressor ProteinsFemaleHippocampusHumansMalePolymorphism, Single NucleotideTemporal LobeAQP4 protein, humanAquaporin 4Co-Repressor ProteinsKCTD1 protein, human

Identifiers

PMID31990937
PMCPMC6986744

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.