Evidence map›Paper›PMID 31990682›Full record

ArticleJCI insight2020

Pneumonia recovery reprograms the alveolar macrophage pool.

Antoine Guillon, Emad I Arafa, Kimberly A Barker, Anna C Belkina, Ian Martin, Anukul T Shenoy, Alicia K Wooten, Carolina Lyon De Ana, Anqi Dai, Adam Labadorf and 7 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Monocytes in pneumonia: Functional plasticity and innate memory (Review).International journal of molecular medicine · 2026
    Review
  3. Myeloid cell reprogramming drives enhanced defense againstProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Lung CD4Cell reports · 2025
    Article
  16. Article
  17. Review
  18. The deadly dance of alveolar macrophages and influenza virus.European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 3 countries.

Antoine GuillonPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Emad I ArafaPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Kimberly A BarkerPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Anna C BelkinaPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Ian MartinPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Anukul T ShenoyPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Alicia K WootenPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Carolina Lyon De AnaPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Anqi DaiBioinformatics Nexus, Boston University, Boston, Massachusetts, USA.
Adam LabadorfBioinformatics Nexus, Boston University, Boston, Massachusetts, USA.
Jaileene Hernandez EscalanteDepartment of Microbiology.
Hans DoomsDepartment of Medicine.
Hélène BlascoCHRU of Tours, Medical Pharmacology Department, Inserm U1253, University of Tours, Tours, France.
Katrina E TraberPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Matthew R JonesPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Lee J QuintonPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Joseph P MizgerdPulmonary Center, Boston University School of Medicine, Boston, Massachusetts, USA.
Boston University · USCzech Academy of Sciences, Institute of Microbiology · CZUniversité de Tours · FR

Funding

Project-005UL1TR001430 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BAIR-MERRITT, MEGAN H, CENTER, DAVID M. · 2015 to 2024
$52.3M
BIOLOGY OF THE LUNG--MULTIDISCIPLINARY PROGRAMT32HL007035 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Darrell N. Kotton, JOSEPH P MIZGERD · 1985 to 2026
$24.3M
Genotype-Phenotype Associations in Pediatric CardiomyopathyR01HL111459 · NHLBI · WAYNE STATE UNIVERSITY · PI LIPSHULTZ, STEVEN EDWARD · 2012 to 2015
$8.6M
Pneumonia BiologyR35HL135756 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI MIZGERD, JOSEPH P · 2017 to 2023
$6.6M
Lung-resident antibacterial heterotypic immunityR01AI115053 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI MIZGERD, JOSEPH P · 2015 to 2023
$4.0M
The Biology of LIF During PneumoniaR01HL111449 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI QUINTON, LEE · 2012 to 2020
$3.7M
The B cell repertoire as a window into the nature and impact of the lung viromeR33HL137081 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FEARNS, RACHEL, KEPLER, THOMAS B · 2019 to 2021
$2.4M
Origins and functional roles of Miwi2-positive multiciliated cells during inflammationR01HL136725 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FINE, ALAN FINE, JONES, MATTHEW ROBERT · 2018 to 2021
$1.6M
Liver-derived protection during pneumonia and sepsisR01GM120060 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI QUINTON, LEE · 2017 to 2020
$1.3M
The Role of Oncostatin-M in PneumoniaK08HL130582 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI TRABER, KATRINA · 2016 to 2020
$821k
Lung Memory B Cell Contributions to Heterotypic Anti-Pneumococcal ImmunityF31HL142199 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BARKER, KIMBERLY ALYNN · 2018 to 2020
$110k
Pneumonia and Alveolar Macrophage ResilienceF31HL147397 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ARAFA, EMAD · 2019 to 2021
$93k
NCATS NIH HHS UL1 TR001430NHLBI NIH HHS F31 HL142199NHLBI NIH HHS F31 HL147397NHLBI NIH HHS K08 HL130582NHLBI NIH HHS L30 HL138777NHLBI NIH HHS R01 HL111449NHLBI NIH HHS R01 HL111459NHLBI NIH HHS R01 HL136725NHLBI NIH HHS R33 HL137081NHLBI NIH HHS R35 HL135756NHLBI NIH HHS T32 HL007035NIAID NIH HHS R01 AI115053NIGMS NIH HHS R01 GM120060
6 · The paper itself

Abstract

Community-acquired pneumonia is a widespread disease with significant morbidity and mortality. Alveolar macrophages are tissue-resident lung cells that play a crucial role in innate immunity against bacteria that cause pneumonia. We hypothesized that alveolar macrophages display adaptive characteristics after resolution of bacterial pneumonia. We studied mice 1 to 6 months after self-limiting lung infections with Streptococcus pneumoniae, the most common cause of bacterial pneumonia. Alveolar macrophages, but not other myeloid cells, recovered from the lung showed long-term modifications of their surface marker phenotype. The remodeling of alveolar macrophages was (a) long-lasting (still observed 6 months after infection), (b) regionally localized (observed only in the affected lobe after lobar pneumonia), and (c) associated with macrophage-dependent enhanced protection against another pneumococcal serotype. Metabolomic and transcriptomic profiling revealed that alveolar macrophages of mice that recovered from pneumonia had new baseline activities and altered responses to infection that better resembled those of adult humans. The enhanced lung protection after mild and self-limiting bacterial respiratory infections includes a profound remodeling of the alveolar macrophage pool that is long-lasting; compartmentalized; and manifest across surface receptors, metabolites, and both resting and stimulated transcriptomes.

Indexed as

AnimalsCell DifferentiationDisease Models, AnimalImmunity, InnateLungMacrophages, AlveolarMiceMyeloid CellsPneumonia, PneumococcalBacterial infectionsInnate immunityMacrophagesPulmonology

Identifiers

PMID31990682
PMCPMC7101156
OpenAlexW3003512459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.