Evidence map›Paper›PMID 31990523›Full record

ArticleACS chemical biology2020

Targeting Cavity-Creating p53 Cancer Mutations with Small-Molecule Stabilizers: the Y220X Paradigm.

Matthias R Bauer, Andreas Krämer, Giovanni Settanni, Rhiannon N Jones, Xiaomin Ni, Raysa Khan Tareque, Alan R Fersht, John Spencer, Andreas C Joerger

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Targeting p53 pathways: mechanisms, structures, and advances in therapy.Signal transduction and targeted therapy · 2023
    Pooled it
  2. Journal of enzyme inhibition and medicinal chemistry · 2026
    Article
  3. Structural basis for T-cell receptor recognition of p53Acta crystallographica. Section D, Structural biology · 2026
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  7. Evolution of Engineered ADAR-Based RNA Editing Systems.International journal of molecular sciences · 2026
    Review
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  10. Polyphenols fromPharmaceutics · 2025
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  13. Emerging Tumor-Agnostic Molecular Targets.Molecular cancer therapeutics · 2024
    Review
  14. Article
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  16. Article
  17. Targeting apoptotic pathways for cancer therapy.The Journal of clinical investigation · 2024
    Review
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  19. Comparison ofBlood neoplasia · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Matthias R BauerMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, United Kingdom.ORCID 0000-0003-4015-6483
Andreas KrämerInstitute of Pharmaceutical Chemistry, Johann Wolfgang Goethe University, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.
Giovanni SettanniPhysics Department, Johannes Gutenberg University, Staudingerweg 7, 55099 Mainz, Germany.ORCID 0000-0003-1338-937X
Rhiannon N JonesDepartment of Chemistry, School of Life Sciences, University of Sussex, Falmer, Brighton, East Sussex BN1 9QJ, United Kingdom.
Xiaomin NiInstitute of Pharmaceutical Chemistry, Johann Wolfgang Goethe University, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.
Raysa Khan TarequeDepartment of Chemistry, School of Life Sciences, University of Sussex, Falmer, Brighton, East Sussex BN1 9QJ, United Kingdom.
Alan R FershtMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, United Kingdom.
John SpencerDepartment of Chemistry, School of Life Sciences, University of Sussex, Falmer, Brighton, East Sussex BN1 9QJ, United Kingdom.ORCID 0000-0001-5231-8836
Andreas C JoergerInstitute of Pharmaceutical Chemistry, Johann Wolfgang Goethe University, Max-von-Laue-Str. 9, 60438, Frankfurt am Main, Germany.ORCID 0000-0002-1232-0138
Goethe University Frankfurt · DEUniversity of Sussex · GBMRC Laboratory of Molecular Biology · GBJohannes Gutenberg University Mainz · DE

Funding

Medical Research Council MC_EX_G0901534Wellcome TrustWorldwide Cancer Research 14-1002
6 · The paper itself

Abstract

We have previously shown that the thermolabile, cavity-creating p53 cancer mutant Y220C can be reactivated by small-molecule stabilizers. In our ongoing efforts to unearth druggable variants of the p53 mutome, we have now analyzed the effects of other cancer-associated mutations at codon 220 on the structure, stability, and dynamics of the p53 DNA-binding domain (DBD). We found that the oncogenic Y220H, Y220N, and Y220S mutations are also highly destabilizing, suggesting that they are largely unfolded under physiological conditions. A high-resolution crystal structure of the Y220S mutant DBD revealed a mutation-induced surface crevice similar to that of Y220C, whereas the corresponding pocket's accessibility to small molecules was blocked in the structure of the Y220H mutant. Accordingly, a series of carbazole-based small molecules, designed for stabilizing the Y220C mutant, also bound to and stabilized the folded state of the Y220S mutant, albeit with varying affinities due to structural differences in the binding pocket of the two mutants. Some of the compounds also bound to and stabilized the Y220N mutant, but not the Y220H mutant. Our data validate the Y220S and Y220N mutants as druggable targets and provide a framework for the design of Y220S or Y220N-specific compounds as well as compounds with dual Y220C/Y220S specificity for use in personalized cancer therapy.

Indexed as

Antineoplastic AgentsCarbazolesCrystallizationDrug Screening Assays, AntitumorGene Expression RegulationHumansModels, MolecularMutant ProteinsMutationProtein BindingProtein DomainsProtein StabilityStructure-Activity RelationshipTumor Suppressor Protein p53Antineoplastic AgentsCarbazolesMutant ProteinsTumor Suppressor Protein p53

Identifiers

PMID31990523
PMCPMC7307883
OpenAlexW3004119070

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.