Evidence map›Paper›PMID 31989164›Full record

ArticleJournal of experimental botany2020

Duplication and functional divergence of a calcium sensor in the Brassicaceae.

Shea M Monihan, Courtney A Magness, Choong-Hwan Ryu, Michelle M McMahon, Mark A Beilstein, Karen S Schumaker

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. NPlant direct · 2020
    Article
  4. The Genome Sequence of AlpineFrontiers in genetics · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shea M MonihanSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
Courtney A MagnessSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
Choong-Hwan RyuSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
Michelle M McMahonSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
Mark A BeilsteinSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
Karen S SchumakerSchool of Plant Sciences, University of Arizona, Tucson, AZ, USA.
University of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presence of varied numbers of CALCINEURIN B-LIKE10 (CBL10) calcium sensor genes in species across the Brassicaceae and the demonstrated role of CBL10 in salt tolerance in Arabidopsis thaliana and Eutrema salsugineum provided a unique opportunity to determine if CBL10 function is modified in different species and linked to salt tolerance. Salinity effects on species growth and cross-species complementation were used to determine the extent of conservation and divergence of CBL10 function in four species representing major lineages within the core Brassicaceae (A. thaliana, E. salsugineum, Schrenkiella parvula, and Sisymbrium irio) as well as the first diverging lineage (Aethionema arabicum). Evolutionary and functional analyses indicate that CBL10 duplicated within expanded lineage II of the Brassicaceae and that, while portions of CBL10 function are conserved across the family, there are species-specific variations in CBL10 function. Paralogous CBL10 genes within a species diverged in expression and function probably contributing to the maintenance of the duplicated gene pairs. Orthologous CBL10 genes diverged in function in a species-specific manner, suggesting that functions arose post-speciation. Multiple CBL10 genes and their functional divergence may have expanded calcium-mediated signaling responses and contributed to the ability of certain members of the Brassicaceae to maintain growth in salt-affected soils.

Indexed as

ArabidopsisArabidopsis ProteinsBrassicaceaeCalcium-Binding ProteinsCalciumSalt ToleranceArabidopsis ProteinsCalciumCalcium-Binding ProteinsCBL10 protein, ArabidopsisBrassicaceaeCALCINEURIN B-LIKE10calcium sensorfunctional divergencegene duplicationsalt tolerance

Identifiers

PMID31989164
PMCPMC7210777
OpenAlexW3004265483

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.